Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RSPO1Q2MKA7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.22■□□□□ 0.19
RSPO1Q2MKA7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO1Q2MKA7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO1Q2MKA7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.22■□□□□ 0.19
RSPO1Q2MKA7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO1Q2MKA7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO1Q2MKA7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO1Q2MKA7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO1Q2MKA7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.21■□□□□ 0.19
RSPO1Q2MKA7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO1Q2MKA7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO1Q2MKA7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.21■□□□□ 0.19
RSPO1Q2MKA7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO1Q2MKA7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.21■□□□□ 0.19
RSPO1Q2MKA7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO1Q2MKA7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO1Q2MKA7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RSPO1Q2MKA7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO1Q2MKA7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO1Q2MKA7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.21■□□□□ 0.19
RSPO1Q2MKA7 INGX-201ENST00000359239 846 ntBASIC16.21■□□□□ 0.19
RSPO1Q2MKA7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
RSPO1Q2MKA7 AL596275.1-201ENST00000423464 877 ntBASIC16.21■□□□□ 0.19
RSPO1Q2MKA7 MCCD1P1-208ENST00000445732 328 ntBASIC16.21■□□□□ 0.19
RSPO1Q2MKA7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RSPO1Q2MKA7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO1Q2MKA7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO1Q2MKA7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO1Q2MKA7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO1Q2MKA7 CYP2D8P-201ENST00000433633 1490 ntBASIC16.21■□□□□ 0.19
RSPO1Q2MKA7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
RSPO1Q2MKA7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RSPO1Q2MKA7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
RSPO1Q2MKA7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.21■□□□□ 0.18
RSPO1Q2MKA7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RSPO1Q2MKA7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
RSPO1Q2MKA7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO1Q2MKA7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RSPO1Q2MKA7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO1Q2MKA7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.2■□□□□ 0.18
RSPO1Q2MKA7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.2■□□□□ 0.18
RSPO1Q2MKA7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RSPO1Q2MKA7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO1Q2MKA7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO1Q2MKA7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.2■□□□□ 0.18
RSPO1Q2MKA7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
RSPO1Q2MKA7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO1Q2MKA7 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.2■□□□□ 0.18
RSPO1Q2MKA7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO1Q2MKA7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.2■□□□□ 0.18
RSPO1Q2MKA7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO1Q2MKA7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO1Q2MKA7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.2■□□□□ 0.18
RSPO1Q2MKA7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.2■□□□□ 0.18
RSPO1Q2MKA7 AC066615.1-201ENST00000640911 628 ntBASIC16.2■□□□□ 0.18
RSPO1Q2MKA7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO1Q2MKA7 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO1Q2MKA7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO1Q2MKA7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO1Q2MKA7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO1Q2MKA7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO1Q2MKA7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
RSPO1Q2MKA7 AC007613.1-201ENST00000572811 2597 ntBASIC16.2■□□□□ 0.18
RSPO1Q2MKA7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RSPO1Q2MKA7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RSPO1Q2MKA7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.19■□□□□ 0.18
RSPO1Q2MKA7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RSPO1Q2MKA7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
RSPO1Q2MKA7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.19■□□□□ 0.18
RSPO1Q2MKA7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RSPO1Q2MKA7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RSPO1Q2MKA7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RSPO1Q2MKA7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RSPO1Q2MKA7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RSPO1Q2MKA7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
RSPO1Q2MKA7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RSPO1Q2MKA7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RSPO1Q2MKA7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RSPO1Q2MKA7 AC007663.1-201ENST00000438948 1240 ntBASIC16.19■□□□□ 0.18
RSPO1Q2MKA7 TSPY17P-201ENST00000450329 467 ntBASIC16.19■□□□□ 0.18
RSPO1Q2MKA7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.19■□□□□ 0.18
RSPO1Q2MKA7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RSPO1Q2MKA7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
RSPO1Q2MKA7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RSPO1Q2MKA7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RSPO1Q2MKA7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RSPO1Q2MKA7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RSPO1Q2MKA7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RSPO1Q2MKA7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RSPO1Q2MKA7 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RSPO1Q2MKA7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RSPO1Q2MKA7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
RSPO1Q2MKA7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RSPO1Q2MKA7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RSPO1Q2MKA7 AL354751.1-201ENST00000412768 1863 ntBASIC16.18■□□□□ 0.18
RSPO1Q2MKA7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RSPO1Q2MKA7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.18■□□□□ 0.18
RSPO1Q2MKA7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RSPO1Q2MKA7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms