Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 AC126763.1-201ENST00000552015 2118 ntBASIC18.92■□□□□ 0.62
CDH17Q12864 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDH17Q12864 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH17Q12864 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CDH17Q12864 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
CDH17Q12864 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CDH17Q12864 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH17Q12864 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH17Q12864 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDH17Q12864 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH17Q12864 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH17Q12864 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.92■□□□□ 0.62
CDH17Q12864 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.92■□□□□ 0.62
CDH17Q12864 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.92■□□□□ 0.62
CDH17Q12864 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDH17Q12864 TMEM191A-211ENST00000637163 1067 ntBASIC18.92■□□□□ 0.62
CDH17Q12864 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CDH17Q12864 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CDH17Q12864 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDH17Q12864 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CDH17Q12864 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH17Q12864 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.92■□□□□ 0.62
CDH17Q12864 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
CDH17Q12864 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH17Q12864 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.92■□□□□ 0.62
CDH17Q12864 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDH17Q12864 AL109659.2-201ENST00000606809 1674 ntBASIC18.92■□□□□ 0.62
CDH17Q12864 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH17Q12864 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH17Q12864 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.91■□□□□ 0.62
CDH17Q12864 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
CDH17Q12864 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH17Q12864 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH17Q12864 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
CDH17Q12864 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDH17Q12864 AL499627.1-201ENST00000569373 2188 ntBASIC18.91■□□□□ 0.62
CDH17Q12864 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH17Q12864 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDH17Q12864 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.91■□□□□ 0.62
CDH17Q12864 MIR718-201ENST00000390190 70 ntBASIC18.91■□□□□ 0.62
CDH17Q12864 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.91■□□□□ 0.62
CDH17Q12864 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.91■□□□□ 0.62
CDH17Q12864 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.91■□□□□ 0.62
CDH17Q12864 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.91■□□□□ 0.62
CDH17Q12864 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.91■□□□□ 0.62
CDH17Q12864 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.91■□□□□ 0.62
CDH17Q12864 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.91■□□□□ 0.62
CDH17Q12864 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.91■□□□□ 0.62
CDH17Q12864 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.91■□□□□ 0.62
CDH17Q12864 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.91■□□□□ 0.62
CDH17Q12864 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.91■□□□□ 0.62
CDH17Q12864 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH17Q12864 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.91■□□□□ 0.62
CDH17Q12864 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH17Q12864 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.91■□□□□ 0.62
CDH17Q12864 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH17Q12864 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CDH17Q12864 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.91■□□□□ 0.62
CDH17Q12864 AC112777.1-201ENST00000540175 1423 ntBASIC18.91■□□□□ 0.62
CDH17Q12864 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH17Q12864 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDH17Q12864 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.9■□□□□ 0.62
CDH17Q12864 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDH17Q12864 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH17Q12864 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.9■□□□□ 0.62
CDH17Q12864 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH17Q12864 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH17Q12864 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.9■□□□□ 0.62
CDH17Q12864 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH17Q12864 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.9■□□□□ 0.62
CDH17Q12864 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CDH17Q12864 CA15P1-201ENST00000481698 905 ntBASIC18.9■□□□□ 0.62
CDH17Q12864 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDH17Q12864 AC008550.1-201ENST00000511500 884 ntBASIC18.9■□□□□ 0.62
CDH17Q12864 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.9■□□□□ 0.62
CDH17Q12864 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.9■□□□□ 0.62
CDH17Q12864 AC008622.2-201ENST00000617006 1229 ntBASIC18.9■□□□□ 0.62
CDH17Q12864 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.9■□□□□ 0.62
CDH17Q12864 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDH17Q12864 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH17Q12864 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CDH17Q12864 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH17Q12864 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH17Q12864 KRT8P45-201ENST00000414328 1447 ntBASIC18.9■□□□□ 0.62
CDH17Q12864 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH17Q12864 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.9■□□□□ 0.62
CDH17Q12864 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH17Q12864 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CDH17Q12864 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.89■□□□□ 0.61
CDH17Q12864 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.89■□□□□ 0.61
CDH17Q12864 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.89■□□□□ 0.61
CDH17Q12864 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.89■□□□□ 0.61
CDH17Q12864 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH17Q12864 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH17Q12864 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH17Q12864 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.89■□□□□ 0.61
CDH17Q12864 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.89■□□□□ 0.61
CDH17Q12864 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.89■□□□□ 0.61
CDH17Q12864 CRYGFP-201ENST00000418459 633 ntBASIC18.89■□□□□ 0.61
CDH17Q12864 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms