Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RPL39P62891 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC13.25□□□□□ -0.29
RPL39P62891 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RPL39P62891 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RPL39P62891 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
RPL39P62891 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RPL39P62891 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RPL39P62891 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RPL39P62891 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC13.25□□□□□ -0.29
RPL39P62891 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RPL39P62891 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RPL39P62891 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RPL39P62891 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC13.25□□□□□ -0.29
RPL39P62891 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC13.25□□□□□ -0.29
RPL39P62891 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
RPL39P62891 AC135776.1-201ENST00000319817 2481 ntBASIC13.24□□□□□ -0.29
RPL39P62891 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RPL39P62891 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RPL39P62891 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC13.24□□□□□ -0.29
RPL39P62891 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC13.24□□□□□ -0.29
RPL39P62891 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RPL39P62891 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC13.24□□□□□ -0.29
RPL39P62891 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RPL39P62891 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RPL39P62891 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RPL39P62891 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC13.24□□□□□ -0.29
RPL39P62891 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RPL39P62891 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC13.24□□□□□ -0.29
RPL39P62891 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC13.24□□□□□ -0.29
RPL39P62891 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RPL39P62891 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RPL39P62891 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RPL39P62891 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC13.24□□□□□ -0.29
RPL39P62891 MFF-205ENST00000354503 1085 ntTSL 2 BASIC13.24□□□□□ -0.29
RPL39P62891 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC13.24□□□□□ -0.29
RPL39P62891 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RPL39P62891 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC13.24□□□□□ -0.29
RPL39P62891 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RPL39P62891 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC13.24□□□□□ -0.29
RPL39P62891 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC13.24□□□□□ -0.29
RPL39P62891 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC13.24□□□□□ -0.29
RPL39P62891 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC13.24□□□□□ -0.29
RPL39P62891 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC13.24□□□□□ -0.29
RPL39P62891 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
RPL39P62891 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RPL39P62891 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RPL39P62891 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RPL39P62891 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC13.24□□□□□ -0.29
RPL39P62891 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
RPL39P62891 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RPL39P62891 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
RPL39P62891 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC13.24□□□□□ -0.29
RPL39P62891 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC13.24□□□□□ -0.29
RPL39P62891 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RPL39P62891 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RPL39P62891 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RPL39P62891 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
RPL39P62891 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RPL39P62891 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RPL39P62891 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RPL39P62891 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RPL39P62891 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC13.23□□□□□ -0.29
RPL39P62891 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RPL39P62891 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RPL39P62891 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RPL39P62891 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RPL39P62891 AC099398.1-201ENST00000567919 2776 ntBASIC13.23□□□□□ -0.29
RPL39P62891 CRK-204ENST00000574295 1391 ntTSL 5 BASIC13.23□□□□□ -0.29
RPL39P62891 GOLGA6L5P-202ENST00000515341 1828 ntBASIC13.23□□□□□ -0.29
RPL39P62891 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
RPL39P62891 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC13.23□□□□□ -0.29
RPL39P62891 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC13.23□□□□□ -0.29
RPL39P62891 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC13.23□□□□□ -0.29
RPL39P62891 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC13.23□□□□□ -0.29
RPL39P62891 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
RPL39P62891 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RPL39P62891 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RPL39P62891 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC13.23□□□□□ -0.29
RPL39P62891 GGT1-206ENST00000404223 952 ntTSL 2 BASIC13.23□□□□□ -0.29
RPL39P62891 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
RPL39P62891 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC13.23□□□□□ -0.29
RPL39P62891 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RPL39P62891 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
RPL39P62891 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RPL39P62891 MAZ-216ENST00000616501 991 ntTSL 5 BASIC13.23□□□□□ -0.29
RPL39P62891 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RPL39P62891 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC13.23□□□□□ -0.29
RPL39P62891 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC13.23□□□□□ -0.29
RPL39P62891 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RPL39P62891 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RPL39P62891 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RPL39P62891 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RPL39P62891 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RPL39P62891 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
RPL39P62891 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RPL39P62891 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RPL39P62891 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC13.23□□□□□ -0.29
RPL39P62891 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
RPL39P62891 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RPL39P62891 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms