Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.68■□□□□ 0.74
USP46P62068 AL161938.1-201ENST00000569833 2180 ntBASIC19.68■□□□□ 0.74
USP46P62068 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.68■□□□□ 0.74
USP46P62068 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP46P62068 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.68■□□□□ 0.74
USP46P62068 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP46P62068 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
USP46P62068 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP46P62068 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP46P62068 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
USP46P62068 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
USP46P62068 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP46P62068 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP46P62068 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP46P62068 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP46P62068 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP46P62068 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP46P62068 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP46P62068 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP46P62068 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.67■□□□□ 0.74
USP46P62068 STARP1-201ENST00000397973 869 ntBASIC19.67■□□□□ 0.74
USP46P62068 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.67■□□□□ 0.74
USP46P62068 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP46P62068 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP46P62068 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP46P62068 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP46P62068 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.67■□□□□ 0.74
USP46P62068 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP46P62068 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
USP46P62068 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP46P62068 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.67■□□□□ 0.74
USP46P62068 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP46P62068 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.67■□□□□ 0.74
USP46P62068 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP46P62068 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
USP46P62068 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.66■□□□□ 0.74
USP46P62068 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP46P62068 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP46P62068 AC112907.2-201ENST00000448639 330 ntBASIC19.66■□□□□ 0.74
USP46P62068 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.66■□□□□ 0.74
USP46P62068 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP46P62068 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.66■□□□□ 0.74
USP46P62068 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP46P62068 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
USP46P62068 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP46P62068 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP46P62068 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP46P62068 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP46P62068 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP46P62068 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP46P62068 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.65■□□□□ 0.74
USP46P62068 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP46P62068 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
USP46P62068 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.65■□□□□ 0.74
USP46P62068 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP46P62068 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.65■□□□□ 0.74
USP46P62068 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP46P62068 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
USP46P62068 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP46P62068 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP46P62068 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP46P62068 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP46P62068 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP46P62068 SEC1P-202ENST00000473944 940 ntBASIC19.65■□□□□ 0.74
USP46P62068 FAM86EP-206ENST00000510506 987 ntBASIC19.65■□□□□ 0.74
USP46P62068 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.65■□□□□ 0.74
USP46P62068 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.65■□□□□ 0.74
USP46P62068 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP46P62068 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
USP46P62068 AC083849.1-201ENST00000615227 514 ntBASIC19.65■□□□□ 0.74
USP46P62068 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.65■□□□□ 0.74
USP46P62068 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP46P62068 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
USP46P62068 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
USP46P62068 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP46P62068 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP46P62068 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP46P62068 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP46P62068 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP46P62068 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP46P62068 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP46P62068 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
USP46P62068 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
USP46P62068 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.74
USP46P62068 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP46P62068 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP46P62068 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP46P62068 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.64■□□□□ 0.73
USP46P62068 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
USP46P62068 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.64■□□□□ 0.73
USP46P62068 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.64■□□□□ 0.73
USP46P62068 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.64■□□□□ 0.73
USP46P62068 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.64■□□□□ 0.73
USP46P62068 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
USP46P62068 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.64■□□□□ 0.73
USP46P62068 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP46P62068 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.64■□□□□ 0.73
USP46P62068 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP46P62068 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
USP46P62068 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms