Protein–RNA interactions for Protein: P59037

LINC00313, Putative uncharacterized protein encoded by LINC00313, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00313P59037 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00313P59037 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00313P59037 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
LINC00313P59037 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC00313P59037 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00313P59037 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC10.69□□□□□ -0.7
LINC00313P59037 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00313P59037 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00313P59037 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00313P59037 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00313P59037 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
LINC00313P59037 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
LINC00313P59037 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00313P59037 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
LINC00313P59037 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC00313P59037 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00313P59037 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC00313P59037 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00313P59037 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
LINC00313P59037 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC10.69□□□□□ -0.7
LINC00313P59037 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00313P59037 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
LINC00313P59037 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
LINC00313P59037 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC10.69□□□□□ -0.7
LINC00313P59037 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
LINC00313P59037 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00313P59037 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00313P59037 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00313P59037 AL512353.2-201ENST00000448759 1962 ntBASIC10.69□□□□□ -0.7
LINC00313P59037 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00313P59037 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
LINC00313P59037 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00313P59037 ME3-201ENST00000323418 1068 ntTSL 5 BASIC10.69□□□□□ -0.7
LINC00313P59037 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC10.69□□□□□ -0.7
LINC00313P59037 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC10.69□□□□□ -0.7
LINC00313P59037 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC10.69□□□□□ -0.7
LINC00313P59037 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00313P59037 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC10.69□□□□□ -0.7
LINC00313P59037 TUBB8P6-201ENST00000436895 1288 ntBASIC10.69□□□□□ -0.7
LINC00313P59037 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC10.69□□□□□ -0.7
LINC00313P59037 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC10.69□□□□□ -0.7
LINC00313P59037 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC00313P59037 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC10.69□□□□□ -0.7
LINC00313P59037 AC006557.6-201ENST00000623071 864 ntBASIC10.69□□□□□ -0.7
LINC00313P59037 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00313P59037 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC00313P59037 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00313P59037 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00313P59037 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00313P59037 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00313P59037 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00313P59037 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00313P59037 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
LINC00313P59037 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00313P59037 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00313P59037 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00313P59037 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC00313P59037 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC10.69□□□□□ -0.7
LINC00313P59037 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00313P59037 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00313P59037 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00313P59037 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00313P59037 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00313P59037 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00313P59037 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
LINC00313P59037 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00313P59037 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00313P59037 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00313P59037 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC00313P59037 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC00313P59037 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC10.68□□□□□ -0.7
LINC00313P59037 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00313P59037 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00313P59037 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC00313P59037 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC10.68□□□□□ -0.7
LINC00313P59037 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC00313P59037 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
LINC00313P59037 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC10.68□□□□□ -0.7
LINC00313P59037 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC10.68□□□□□ -0.7
LINC00313P59037 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC00313P59037 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC10.68□□□□□ -0.7
LINC00313P59037 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC10.68□□□□□ -0.7
LINC00313P59037 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC00313P59037 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC10.68□□□□□ -0.7
LINC00313P59037 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00313P59037 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
LINC00313P59037 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC10.68□□□□□ -0.7
LINC00313P59037 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00313P59037 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00313P59037 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00313P59037 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00313P59037 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00313P59037 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00313P59037 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC00313P59037 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC00313P59037 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00313P59037 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00313P59037 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00313P59037 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00313P59037 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC10.67□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms