Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM11AP58511 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.28■□□□□ 0.36
SMIM11AP58511 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
SMIM11AP58511 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.28■□□□□ 0.36
SMIM11AP58511 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM11AP58511 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.28■□□□□ 0.36
SMIM11AP58511 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.28■□□□□ 0.36
SMIM11AP58511 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM11AP58511 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
SMIM11AP58511 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM11AP58511 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SMIM11AP58511 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.28■□□□□ 0.36
SMIM11AP58511 AC068587.9-201ENST00000641814 219 ntBASIC17.28■□□□□ 0.36
SMIM11AP58511 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM11AP58511 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM11AP58511 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.28■□□□□ 0.36
SMIM11AP58511 AC112777.1-201ENST00000540175 1423 ntBASIC17.28■□□□□ 0.36
SMIM11AP58511 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.28■□□□□ 0.36
SMIM11AP58511 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM11AP58511 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM11AP58511 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.28■□□□□ 0.36
SMIM11AP58511 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMIM11AP58511 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
SMIM11AP58511 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMIM11AP58511 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
SMIM11AP58511 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SMIM11AP58511 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMIM11AP58511 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMIM11AP58511 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.27■□□□□ 0.36
SMIM11AP58511 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SMIM11AP58511 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMIM11AP58511 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMIM11AP58511 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.27■□□□□ 0.36
SMIM11AP58511 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SMIM11AP58511 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SMIM11AP58511 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.27■□□□□ 0.36
SMIM11AP58511 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.27■□□□□ 0.36
SMIM11AP58511 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.27■□□□□ 0.36
SMIM11AP58511 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMIM11AP58511 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SMIM11AP58511 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMIM11AP58511 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMIM11AP58511 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMIM11AP58511 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMIM11AP58511 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMIM11AP58511 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
SMIM11AP58511 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.27■□□□□ 0.35
SMIM11AP58511 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM11AP58511 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.26■□□□□ 0.35
SMIM11AP58511 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM11AP58511 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SMIM11AP58511 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM11AP58511 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM11AP58511 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM11AP58511 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM11AP58511 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM11AP58511 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM11AP58511 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM11AP58511 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM11AP58511 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM11AP58511 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.26■□□□□ 0.35
SMIM11AP58511 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.26■□□□□ 0.35
SMIM11AP58511 AC069152.1-201ENST00000438030 544 ntBASIC17.26■□□□□ 0.35
SMIM11AP58511 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.26■□□□□ 0.35
SMIM11AP58511 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM11AP58511 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM11AP58511 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.26■□□□□ 0.35
SMIM11AP58511 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM11AP58511 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SMIM11AP58511 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.26■□□□□ 0.35
SMIM11AP58511 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM11AP58511 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM11AP58511 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM11AP58511 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM11AP58511 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.26■□□□□ 0.35
SMIM11AP58511 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM11AP58511 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM11AP58511 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM11AP58511 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMIM11AP58511 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.25■□□□□ 0.35
SMIM11AP58511 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMIM11AP58511 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SMIM11AP58511 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.25■□□□□ 0.35
SMIM11AP58511 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMIM11AP58511 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.25■□□□□ 0.35
SMIM11AP58511 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMIM11AP58511 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.25■□□□□ 0.35
SMIM11AP58511 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMIM11AP58511 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SMIM11AP58511 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMIM11AP58511 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMIM11AP58511 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.25■□□□□ 0.35
SMIM11AP58511 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.25■□□□□ 0.35
SMIM11AP58511 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.25■□□□□ 0.35
SMIM11AP58511 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.25■□□□□ 0.35
SMIM11AP58511 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.25■□□□□ 0.35
SMIM11AP58511 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMIM11AP58511 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMIM11AP58511 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.25■□□□□ 0.35
SMIM11AP58511 AL133373.2-201ENST00000623187 2828 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms