Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDH6P55285 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CDH6P55285 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CDH6P55285 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH6P55285 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDH6P55285 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.48■□□□□ 0.71
CDH6P55285 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.48■□□□□ 0.71
CDH6P55285 AC090164.3-201ENST00000610780 2143 ntBASIC19.48■□□□□ 0.71
CDH6P55285 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CDH6P55285 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.48■□□□□ 0.71
CDH6P55285 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH6P55285 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CDH6P55285 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.48■□□□□ 0.71
CDH6P55285 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CDH6P55285 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CDH6P55285 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.48■□□□□ 0.71
CDH6P55285 CRYGFP-201ENST00000418459 633 ntBASIC19.48■□□□□ 0.71
CDH6P55285 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.48■□□□□ 0.71
CDH6P55285 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.48■□□□□ 0.71
CDH6P55285 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.48■□□□□ 0.71
CDH6P55285 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.48■□□□□ 0.71
CDH6P55285 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH6P55285 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.48■□□□□ 0.71
CDH6P55285 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CDH6P55285 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.48■□□□□ 0.71
CDH6P55285 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH6P55285 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.48■□□□□ 0.71
CDH6P55285 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH6P55285 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH6P55285 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CDH6P55285 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.48■□□□□ 0.71
CDH6P55285 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH6P55285 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.48■□□□□ 0.71
CDH6P55285 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH6P55285 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.48■□□□□ 0.71
CDH6P55285 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH6P55285 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH6P55285 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH6P55285 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH6P55285 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH6P55285 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
CDH6P55285 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH6P55285 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDH6P55285 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.47■□□□□ 0.71
CDH6P55285 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.47■□□□□ 0.71
CDH6P55285 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDH6P55285 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH6P55285 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH6P55285 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH6P55285 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.47■□□□□ 0.71
CDH6P55285 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.47■□□□□ 0.71
CDH6P55285 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH6P55285 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.47■□□□□ 0.71
CDH6P55285 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.47■□□□□ 0.71
CDH6P55285 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.47■□□□□ 0.71
CDH6P55285 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.47■□□□□ 0.71
CDH6P55285 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.47■□□□□ 0.71
CDH6P55285 AC008622.2-201ENST00000617006 1229 ntBASIC19.47■□□□□ 0.71
CDH6P55285 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CDH6P55285 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CDH6P55285 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.47■□□□□ 0.71
CDH6P55285 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDH6P55285 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH6P55285 AL499627.1-201ENST00000569373 2188 ntBASIC19.47■□□□□ 0.71
CDH6P55285 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CDH6P55285 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.47■□□□□ 0.71
CDH6P55285 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
CDH6P55285 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDH6P55285 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.47■□□□□ 0.71
CDH6P55285 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDH6P55285 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH6P55285 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH6P55285 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH6P55285 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CDH6P55285 AL357033.4-201ENST00000617703 1807 ntBASIC19.46■□□□□ 0.71
CDH6P55285 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
CDH6P55285 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.46■□□□□ 0.71
CDH6P55285 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH6P55285 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDH6P55285 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH6P55285 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CDH6P55285 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDH6P55285 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.46■□□□□ 0.71
CDH6P55285 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDH6P55285 SNORA78-201ENST00000459373 127 ntBASIC19.46■□□□□ 0.71
CDH6P55285 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.46■□□□□ 0.71
CDH6P55285 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.46■□□□□ 0.71
CDH6P55285 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.46■□□□□ 0.71
CDH6P55285 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CDH6P55285 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.46■□□□□ 0.71
CDH6P55285 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.46■□□□□ 0.71
CDH6P55285 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH6P55285 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH6P55285 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.46■□□□□ 0.71
CDH6P55285 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDH6P55285 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.46■□□□□ 0.71
CDH6P55285 HCG11-201ENST00000411553 5696 ntBASIC19.46■□□□□ 0.71
CDH6P55285 AC126763.1-201ENST00000552015 2118 ntBASIC19.46■□□□□ 0.71
CDH6P55285 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDH6P55285 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms