Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.68■□□□□ 0.26
CSNK1A1P48729 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CSNK1A1P48729 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.68■□□□□ 0.26
CSNK1A1P48729 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
CSNK1A1P48729 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
CSNK1A1P48729 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSNK1A1P48729 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSNK1A1P48729 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSNK1A1P48729 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.68■□□□□ 0.26
CSNK1A1P48729 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
CSNK1A1P48729 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CSNK1A1P48729 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CSNK1A1P48729 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSNK1A1P48729 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CSNK1A1P48729 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSNK1A1P48729 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSNK1A1P48729 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSNK1A1P48729 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.67■□□□□ 0.26
CSNK1A1P48729 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSNK1A1P48729 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSNK1A1P48729 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CSNK1A1P48729 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSNK1A1P48729 AL031598.1-201ENST00000561511 1773 ntBASIC16.67■□□□□ 0.26
CSNK1A1P48729 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CSNK1A1P48729 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CSNK1A1P48729 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CSNK1A1P48729 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSNK1A1P48729 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSNK1A1P48729 MIR1238-201ENST00000408483 83 ntBASIC16.67■□□□□ 0.26
CSNK1A1P48729 FITM1-202ENST00000559294 800 ntBASIC16.67■□□□□ 0.26
CSNK1A1P48729 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.67■□□□□ 0.26
CSNK1A1P48729 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.67■□□□□ 0.26
CSNK1A1P48729 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSNK1A1P48729 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.67■□□□□ 0.26
CSNK1A1P48729 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.67■□□□□ 0.26
CSNK1A1P48729 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSNK1A1P48729 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CSNK1A1P48729 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CSNK1A1P48729 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSNK1A1P48729 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.67■□□□□ 0.26
CSNK1A1P48729 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSNK1A1P48729 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1A1P48729 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1A1P48729 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1A1P48729 RCC2P3-201ENST00000418112 1537 ntBASIC16.66■□□□□ 0.26
CSNK1A1P48729 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
CSNK1A1P48729 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1A1P48729 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1A1P48729 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1A1P48729 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CSNK1A1P48729 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.66■□□□□ 0.26
CSNK1A1P48729 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1A1P48729 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1A1P48729 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.66■□□□□ 0.26
CSNK1A1P48729 AL390955.1-201ENST00000428694 934 ntBASIC16.66■□□□□ 0.26
CSNK1A1P48729 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.66■□□□□ 0.26
CSNK1A1P48729 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.66■□□□□ 0.26
CSNK1A1P48729 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.66■□□□□ 0.26
CSNK1A1P48729 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1A1P48729 AC068587.9-201ENST00000641814 219 ntBASIC16.66■□□□□ 0.26
CSNK1A1P48729 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1A1P48729 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.66■□□□□ 0.26
CSNK1A1P48729 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1A1P48729 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1A1P48729 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1A1P48729 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CSNK1A1P48729 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1A1P48729 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1A1P48729 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1A1P48729 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1A1P48729 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1A1P48729 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.65■□□□□ 0.26
CSNK1A1P48729 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.65■□□□□ 0.26
CSNK1A1P48729 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1A1P48729 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.65■□□□□ 0.26
CSNK1A1P48729 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.65■□□□□ 0.26
CSNK1A1P48729 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.65■□□□□ 0.26
CSNK1A1P48729 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1A1P48729 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1A1P48729 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1A1P48729 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.65■□□□□ 0.26
CSNK1A1P48729 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1A1P48729 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1A1P48729 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1A1P48729 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CSNK1A1P48729 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CSNK1A1P48729 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.65■□□□□ 0.26
CSNK1A1P48729 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1A1P48729 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CSNK1A1P48729 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
CSNK1A1P48729 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.65■□□□□ 0.26
CSNK1A1P48729 ANO7L1-203ENST00000602586 1720 ntBASIC16.65■□□□□ 0.26
CSNK1A1P48729 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1A1P48729 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.64■□□□□ 0.26
CSNK1A1P48729 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1A1P48729 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1A1P48729 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
CSNK1A1P48729 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1A1P48729 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
CSNK1A1P48729 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms