Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
CHRNA4P43681 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.89■□□□□ 0.61
CHRNA4P43681 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.89■□□□□ 0.61
CHRNA4P43681 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.89■□□□□ 0.61
CHRNA4P43681 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.89■□□□□ 0.61
CHRNA4P43681 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNA4P43681 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNA4P43681 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CHRNA4P43681 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNA4P43681 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNA4P43681 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNA4P43681 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNA4P43681 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNA4P43681 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNA4P43681 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA4P43681 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.88■□□□□ 0.61
CHRNA4P43681 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA4P43681 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA4P43681 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA4P43681 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.88■□□□□ 0.61
CHRNA4P43681 SLC25A1P2-201ENST00000430693 912 ntBASIC18.88■□□□□ 0.61
CHRNA4P43681 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.88■□□□□ 0.61
CHRNA4P43681 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA4P43681 AP003041.3-201ENST00000527151 707 ntBASIC18.88■□□□□ 0.61
CHRNA4P43681 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA4P43681 AC010947.1-201ENST00000623454 693 ntBASIC18.88■□□□□ 0.61
CHRNA4P43681 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.88■□□□□ 0.61
CHRNA4P43681 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CHRNA4P43681 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CHRNA4P43681 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CHRNA4P43681 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA4P43681 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA4P43681 AL109659.2-201ENST00000606809 1674 ntBASIC18.88■□□□□ 0.61
CHRNA4P43681 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CHRNA4P43681 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA4P43681 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA4P43681 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CHRNA4P43681 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA4P43681 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA4P43681 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA4P43681 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
CHRNA4P43681 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNA4P43681 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNA4P43681 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNA4P43681 MMP23A-201ENST00000234610 1017 ntBASIC18.87■□□□□ 0.61
CHRNA4P43681 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNA4P43681 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNA4P43681 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNA4P43681 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNA4P43681 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNA4P43681 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.87■□□□□ 0.61
CHRNA4P43681 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNA4P43681 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CHRNA4P43681 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.87■□□□□ 0.61
CHRNA4P43681 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
CHRNA4P43681 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.87■□□□□ 0.61
CHRNA4P43681 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNA4P43681 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.87■□□□□ 0.61
CHRNA4P43681 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CHRNA4P43681 C2orf69P3-201ENST00000565542 1120 ntBASIC18.87■□□□□ 0.61
CHRNA4P43681 AL353719.1-201ENST00000566847 864 ntBASIC18.87■□□□□ 0.61
CHRNA4P43681 AC092338.2-201ENST00000568827 1415 ntBASIC18.87■□□□□ 0.61
CHRNA4P43681 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.87■□□□□ 0.61
CHRNA4P43681 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.87■□□□□ 0.61
CHRNA4P43681 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNA4P43681 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNA4P43681 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA4P43681 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA4P43681 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA4P43681 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA4P43681 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA4P43681 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.86■□□□□ 0.61
CHRNA4P43681 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.86■□□□□ 0.61
CHRNA4P43681 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.86■□□□□ 0.61
CHRNA4P43681 AC007663.1-201ENST00000438948 1240 ntBASIC18.86■□□□□ 0.61
CHRNA4P43681 MCCD1P1-208ENST00000445732 328 ntBASIC18.86■□□□□ 0.61
CHRNA4P43681 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
CHRNA4P43681 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.86■□□□□ 0.61
CHRNA4P43681 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.86■□□□□ 0.61
CHRNA4P43681 BX088651.1-201ENST00000540551 451 ntBASIC18.86■□□□□ 0.61
CHRNA4P43681 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA4P43681 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.86■□□□□ 0.61
CHRNA4P43681 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA4P43681 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.86■□□□□ 0.61
CHRNA4P43681 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.86■□□□□ 0.61
CHRNA4P43681 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA4P43681 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA4P43681 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA4P43681 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA4P43681 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CHRNA4P43681 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA4P43681 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA4P43681 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.86■□□□□ 0.61
CHRNA4P43681 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.86■□□□□ 0.61
CHRNA4P43681 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CHRNA4P43681 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNA4P43681 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNA4P43681 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CHRNA4P43681 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CHRNA4P43681 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms