Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSR1P43307 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSR1P43307 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SSR1P43307 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SSR1P43307 RPS2P4-201ENST00000476944 856 ntBASIC19.9■□□□□ 0.78
SSR1P43307 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.9■□□□□ 0.78
SSR1P43307 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.9■□□□□ 0.78
SSR1P43307 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSR1P43307 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSR1P43307 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
SSR1P43307 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSR1P43307 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSR1P43307 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSR1P43307 AL512353.2-201ENST00000448759 1962 ntBASIC19.9■□□□□ 0.78
SSR1P43307 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SSR1P43307 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSR1P43307 AC011270.2-201ENST00000624293 2550 ntBASIC19.9■□□□□ 0.78
SSR1P43307 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.89■□□□□ 0.78
SSR1P43307 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
SSR1P43307 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
SSR1P43307 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.89■□□□□ 0.77
SSR1P43307 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SSR1P43307 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SSR1P43307 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSR1P43307 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSR1P43307 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSR1P43307 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SSR1P43307 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSR1P43307 KRT18P29-201ENST00000397031 1267 ntBASIC19.89■□□□□ 0.77
SSR1P43307 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.89■□□□□ 0.77
SSR1P43307 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSR1P43307 NIFKP9-201ENST00000419265 221 ntBASIC19.89■□□□□ 0.77
SSR1P43307 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.89■□□□□ 0.77
SSR1P43307 TSPY20P-201ENST00000450910 630 ntBASIC19.89■□□□□ 0.77
SSR1P43307 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SSR1P43307 Z85996.1-201ENST00000494644 937 ntBASIC19.89■□□□□ 0.77
SSR1P43307 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
SSR1P43307 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.89■□□□□ 0.77
SSR1P43307 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSR1P43307 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSR1P43307 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SSR1P43307 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.89■□□□□ 0.77
SSR1P43307 AL445675.2-201ENST00000620291 557 ntBASIC19.89■□□□□ 0.77
SSR1P43307 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSR1P43307 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSR1P43307 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSR1P43307 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSR1P43307 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
SSR1P43307 WIZP1-201ENST00000531444 2299 ntBASIC19.88■□□□□ 0.77
SSR1P43307 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSR1P43307 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSR1P43307 Z98044.1-201ENST00000632503 1764 ntBASIC19.88■□□□□ 0.77
SSR1P43307 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSR1P43307 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSR1P43307 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.88■□□□□ 0.77
SSR1P43307 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSR1P43307 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SSR1P43307 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.88■□□□□ 0.77
SSR1P43307 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSR1P43307 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SSR1P43307 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSR1P43307 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SSR1P43307 CR392000.1-201ENST00000624770 1228 ntBASIC19.88■□□□□ 0.77
SSR1P43307 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SSR1P43307 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSR1P43307 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSR1P43307 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSR1P43307 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSR1P43307 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSR1P43307 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSR1P43307 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSR1P43307 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSR1P43307 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.87■□□□□ 0.77
SSR1P43307 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
SSR1P43307 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSR1P43307 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSR1P43307 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSR1P43307 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSR1P43307 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSR1P43307 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SSR1P43307 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSR1P43307 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSR1P43307 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SSR1P43307 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.87■□□□□ 0.77
SSR1P43307 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSR1P43307 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SSR1P43307 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.87■□□□□ 0.77
SSR1P43307 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSR1P43307 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
SSR1P43307 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSR1P43307 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSR1P43307 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SSR1P43307 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.87■□□□□ 0.77
SSR1P43307 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.87■□□□□ 0.77
SSR1P43307 AL031598.1-201ENST00000561511 1773 ntBASIC19.87■□□□□ 0.77
SSR1P43307 AC020916.1-201ENST00000587762 1774 ntBASIC19.87■□□□□ 0.77
SSR1P43307 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSR1P43307 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSR1P43307 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSR1P43307 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms