Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A3P43003 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A3P43003 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SLC1A3P43003 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A3P43003 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A3P43003 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A3P43003 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A3P43003 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A3P43003 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.23■□□□□ 0.35
SLC1A3P43003 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SLC1A3P43003 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SLC1A3P43003 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SLC1A3P43003 MIR718-201ENST00000390190 70 ntBASIC17.23■□□□□ 0.35
SLC1A3P43003 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
SLC1A3P43003 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A3P43003 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.23■□□□□ 0.35
SLC1A3P43003 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.23■□□□□ 0.35
SLC1A3P43003 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.23■□□□□ 0.35
SLC1A3P43003 Z99916.2-201ENST00000604037 246 ntBASIC17.23■□□□□ 0.35
SLC1A3P43003 AP000692.2-201ENST00000608391 879 ntBASIC17.23■□□□□ 0.35
SLC1A3P43003 AC083906.6-201ENST00000641366 219 ntBASIC17.23■□□□□ 0.35
SLC1A3P43003 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A3P43003 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A3P43003 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A3P43003 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A3P43003 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A3P43003 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A3P43003 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A3P43003 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SLC1A3P43003 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SLC1A3P43003 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SLC1A3P43003 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A3P43003 AL512353.2-201ENST00000448759 1962 ntBASIC17.22■□□□□ 0.35
SLC1A3P43003 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A3P43003 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A3P43003 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A3P43003 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A3P43003 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A3P43003 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A3P43003 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A3P43003 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC1A3P43003 AC008550.1-201ENST00000511500 884 ntBASIC17.22■□□□□ 0.35
SLC1A3P43003 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC1A3P43003 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.22■□□□□ 0.35
SLC1A3P43003 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.22■□□□□ 0.35
SLC1A3P43003 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.22■□□□□ 0.35
SLC1A3P43003 DGCR10-201ENST00000609839 495 ntBASIC17.22■□□□□ 0.35
SLC1A3P43003 AC066615.1-201ENST00000640911 628 ntBASIC17.22■□□□□ 0.35
SLC1A3P43003 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SLC1A3P43003 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A3P43003 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A3P43003 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A3P43003 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC1A3P43003 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A3P43003 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A3P43003 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A3P43003 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A3P43003 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC1A3P43003 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC1A3P43003 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC1A3P43003 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SLC1A3P43003 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
SLC1A3P43003 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC1A3P43003 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC1A3P43003 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SLC1A3P43003 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC1A3P43003 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC1A3P43003 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC1A3P43003 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC1A3P43003 AL354751.1-201ENST00000412768 1863 ntBASIC17.21■□□□□ 0.35
SLC1A3P43003 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC1A3P43003 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC1A3P43003 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SLC1A3P43003 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC1A3P43003 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC1A3P43003 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.21■□□□□ 0.35
SLC1A3P43003 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.21■□□□□ 0.35
SLC1A3P43003 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC1A3P43003 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SLC1A3P43003 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC1A3P43003 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC1A3P43003 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC1A3P43003 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC1A3P43003 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.21■□□□□ 0.35
SLC1A3P43003 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SLC1A3P43003 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC1A3P43003 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC1A3P43003 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC1A3P43003 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC1A3P43003 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC1A3P43003 KRT8P3-201ENST00000519669 1449 ntBASIC17.21■□□□□ 0.34
SLC1A3P43003 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
SLC1A3P43003 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
SLC1A3P43003 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC1A3P43003 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.2■□□□□ 0.34
SLC1A3P43003 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.2■□□□□ 0.34
SLC1A3P43003 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC1A3P43003 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC1A3P43003 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC1A3P43003 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms