Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT20P35900 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT20P35900 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.81■□□□□ 0.44
KRT20P35900 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
KRT20P35900 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT20P35900 AL133373.2-201ENST00000623187 2828 ntBASIC17.8■□□□□ 0.44
KRT20P35900 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KRT20P35900 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.8■□□□□ 0.44
KRT20P35900 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT20P35900 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT20P35900 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT20P35900 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KRT20P35900 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT20P35900 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT20P35900 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT20P35900 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KRT20P35900 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT20P35900 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.8■□□□□ 0.44
KRT20P35900 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.8■□□□□ 0.44
KRT20P35900 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.8■□□□□ 0.44
KRT20P35900 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KRT20P35900 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT20P35900 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.8■□□□□ 0.44
KRT20P35900 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT20P35900 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.8■□□□□ 0.44
KRT20P35900 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.8■□□□□ 0.44
KRT20P35900 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.8■□□□□ 0.44
KRT20P35900 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
KRT20P35900 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.8■□□□□ 0.44
KRT20P35900 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.8■□□□□ 0.44
KRT20P35900 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT20P35900 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.8■□□□□ 0.44
KRT20P35900 AC104417.2-201ENST00000562989 1793 ntBASIC17.8■□□□□ 0.44
KRT20P35900 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT20P35900 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT20P35900 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
KRT20P35900 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.8■□□□□ 0.44
KRT20P35900 PCDHB18P-201ENST00000524813 2368 ntBASIC17.8■□□□□ 0.44
KRT20P35900 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KRT20P35900 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT20P35900 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.79■□□□□ 0.44
KRT20P35900 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT20P35900 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
KRT20P35900 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT20P35900 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KRT20P35900 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KRT20P35900 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT20P35900 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT20P35900 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.79■□□□□ 0.44
KRT20P35900 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT20P35900 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
KRT20P35900 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT20P35900 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT20P35900 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT20P35900 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.79■□□□□ 0.44
KRT20P35900 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
KRT20P35900 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
KRT20P35900 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KRT20P35900 AC233702.5-201ENST00000584107 538 ntBASIC17.79■□□□□ 0.44
KRT20P35900 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT20P35900 CD177P1-201ENST00000606252 935 ntBASIC17.79■□□□□ 0.44
KRT20P35900 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.79■□□□□ 0.44
KRT20P35900 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT20P35900 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT20P35900 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
KRT20P35900 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT20P35900 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
KRT20P35900 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT20P35900 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT20P35900 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KRT20P35900 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT20P35900 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.78■□□□□ 0.44
KRT20P35900 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.78■□□□□ 0.44
KRT20P35900 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
KRT20P35900 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT20P35900 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
KRT20P35900 FAM197Y1-201ENST00000421178 764 ntBASIC17.78■□□□□ 0.44
KRT20P35900 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.78■□□□□ 0.44
KRT20P35900 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.78■□□□□ 0.44
KRT20P35900 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.78■□□□□ 0.44
KRT20P35900 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.78■□□□□ 0.44
KRT20P35900 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.78■□□□□ 0.44
KRT20P35900 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.78■□□□□ 0.44
KRT20P35900 AL049637.2-201ENST00000641778 930 ntBASIC17.78■□□□□ 0.44
KRT20P35900 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT20P35900 LTB4R2-202ENST00000528054 3092 ntBASIC17.78■□□□□ 0.44
KRT20P35900 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT20P35900 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KRT20P35900 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT20P35900 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
KRT20P35900 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT20P35900 AC090164.3-201ENST00000610780 2143 ntBASIC17.78■□□□□ 0.44
KRT20P35900 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT20P35900 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KRT20P35900 WIZP1-201ENST00000531444 2299 ntBASIC17.78■□□□□ 0.44
KRT20P35900 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT20P35900 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT20P35900 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
KRT20P35900 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.78■□□□□ 0.44
KRT20P35900 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms