Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.79■□□□□ 0.28
SOX6P35712 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SOX6P35712 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SOX6P35712 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX6P35712 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
SOX6P35712 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
SOX6P35712 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.79■□□□□ 0.28
SOX6P35712 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SOX6P35712 KRT19P1-201ENST00000405746 1186 ntBASIC16.79■□□□□ 0.28
SOX6P35712 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.79■□□□□ 0.28
SOX6P35712 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SOX6P35712 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SOX6P35712 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX6P35712 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX6P35712 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX6P35712 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX6P35712 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SOX6P35712 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX6P35712 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX6P35712 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SOX6P35712 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX6P35712 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.79■□□□□ 0.28
SOX6P35712 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SOX6P35712 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.79■□□□□ 0.28
SOX6P35712 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.78■□□□□ 0.28
SOX6P35712 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX6P35712 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX6P35712 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SOX6P35712 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX6P35712 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX6P35712 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX6P35712 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX6P35712 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.78■□□□□ 0.28
SOX6P35712 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX6P35712 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX6P35712 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX6P35712 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.78■□□□□ 0.28
SOX6P35712 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX6P35712 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX6P35712 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SOX6P35712 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX6P35712 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.78■□□□□ 0.28
SOX6P35712 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.78■□□□□ 0.28
SOX6P35712 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.78■□□□□ 0.28
SOX6P35712 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.78■□□□□ 0.28
SOX6P35712 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SOX6P35712 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SOX6P35712 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SOX6P35712 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX6P35712 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SOX6P35712 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.78■□□□□ 0.28
SOX6P35712 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.78■□□□□ 0.28
SOX6P35712 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX6P35712 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SOX6P35712 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX6P35712 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.78■□□□□ 0.28
SOX6P35712 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX6P35712 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SOX6P35712 AC004854.2-201ENST00000608450 1441 ntBASIC16.78■□□□□ 0.28
SOX6P35712 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX6P35712 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX6P35712 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.78■□□□□ 0.28
SOX6P35712 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SOX6P35712 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX6P35712 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SOX6P35712 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.77■□□□□ 0.28
SOX6P35712 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.77■□□□□ 0.28
SOX6P35712 SDHAP1-207ENST00000440850 2000 ntBASIC16.77■□□□□ 0.28
SOX6P35712 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SOX6P35712 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SOX6P35712 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.77■□□□□ 0.28
SOX6P35712 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.77■□□□□ 0.28
SOX6P35712 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
SOX6P35712 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
SOX6P35712 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SOX6P35712 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.77■□□□□ 0.28
SOX6P35712 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SOX6P35712 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SOX6P35712 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SOX6P35712 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
SOX6P35712 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.77■□□□□ 0.28
SOX6P35712 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
SOX6P35712 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.77■□□□□ 0.28
SOX6P35712 AL162430.1-201ENST00000480705 870 ntBASIC16.77■□□□□ 0.28
SOX6P35712 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SOX6P35712 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.77■□□□□ 0.28
SOX6P35712 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
SOX6P35712 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.77■□□□□ 0.28
SOX6P35712 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
SOX6P35712 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.77■□□□□ 0.28
SOX6P35712 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.77■□□□□ 0.28
SOX6P35712 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SOX6P35712 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.77■□□□□ 0.28
SOX6P35712 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SOX6P35712 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SOX6P35712 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.77■□□□□ 0.27
SOX6P35712 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.77■□□□□ 0.27
SOX6P35712 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SOX6P35712 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.77■□□□□ 0.27
SOX6P35712 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms