Protein–RNA interactions for Protein: P34903

GABRA3, Gamma-aminobutyric acid receptor subunit alpha-3, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3P34903 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GABRA3P34903 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
GABRA3P34903 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.42■□□□□ 0.38
GABRA3P34903 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GABRA3P34903 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GABRA3P34903 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.41■□□□□ 0.38
GABRA3P34903 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GABRA3P34903 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.41■□□□□ 0.38
GABRA3P34903 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.41■□□□□ 0.38
GABRA3P34903 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GABRA3P34903 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
GABRA3P34903 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.41■□□□□ 0.38
GABRA3P34903 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.41■□□□□ 0.38
GABRA3P34903 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
GABRA3P34903 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.41■□□□□ 0.38
GABRA3P34903 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GABRA3P34903 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GABRA3P34903 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
GABRA3P34903 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.41■□□□□ 0.38
GABRA3P34903 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GABRA3P34903 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.41■□□□□ 0.38
GABRA3P34903 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
GABRA3P34903 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.41■□□□□ 0.38
GABRA3P34903 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.41■□□□□ 0.38
GABRA3P34903 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
GABRA3P34903 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
GABRA3P34903 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GABRA3P34903 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GABRA3P34903 MTMR9LP-203ENST00000426597 1545 ntBASIC17.41■□□□□ 0.38
GABRA3P34903 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GABRA3P34903 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GABRA3P34903 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.4■□□□□ 0.38
GABRA3P34903 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
GABRA3P34903 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
GABRA3P34903 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABRA3P34903 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
GABRA3P34903 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABRA3P34903 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.4■□□□□ 0.38
GABRA3P34903 WIZP1-201ENST00000531444 2299 ntBASIC17.4■□□□□ 0.38
GABRA3P34903 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABRA3P34903 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABRA3P34903 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABRA3P34903 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABRA3P34903 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABRA3P34903 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABRA3P34903 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABRA3P34903 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.4■□□□□ 0.38
GABRA3P34903 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GABRA3P34903 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.4■□□□□ 0.38
GABRA3P34903 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.4■□□□□ 0.38
GABRA3P34903 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GABRA3P34903 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GABRA3P34903 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABRA3P34903 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GABRA3P34903 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.4■□□□□ 0.38
GABRA3P34903 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABRA3P34903 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABRA3P34903 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.4■□□□□ 0.38
GABRA3P34903 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABRA3P34903 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABRA3P34903 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.4■□□□□ 0.38
GABRA3P34903 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
GABRA3P34903 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
GABRA3P34903 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GABRA3P34903 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GABRA3P34903 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
GABRA3P34903 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.39■□□□□ 0.37
GABRA3P34903 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.39■□□□□ 0.37
GABRA3P34903 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.39■□□□□ 0.37
GABRA3P34903 AL023284.2-201ENST00000405850 579 ntBASIC17.39■□□□□ 0.37
GABRA3P34903 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.39■□□□□ 0.37
GABRA3P34903 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GABRA3P34903 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GABRA3P34903 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GABRA3P34903 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.39■□□□□ 0.37
GABRA3P34903 AL357033.4-201ENST00000617703 1807 ntBASIC17.39■□□□□ 0.37
GABRA3P34903 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GABRA3P34903 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GABRA3P34903 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GABRA3P34903 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GABRA3P34903 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
GABRA3P34903 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.39■□□□□ 0.37
GABRA3P34903 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.39■□□□□ 0.37
GABRA3P34903 GPAT2P1-201ENST00000444924 1672 ntBASIC17.39■□□□□ 0.37
GABRA3P34903 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GABRA3P34903 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
GABRA3P34903 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
GABRA3P34903 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GABRA3P34903 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GABRA3P34903 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.38■□□□□ 0.37
GABRA3P34903 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
GABRA3P34903 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
GABRA3P34903 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
GABRA3P34903 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
GABRA3P34903 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.38■□□□□ 0.37
GABRA3P34903 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
GABRA3P34903 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GABRA3P34903 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GABRA3P34903 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
GABRA3P34903 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms