Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHC1P29353 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHC1P29353 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHC1P29353 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHC1P29353 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SHC1P29353 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHC1P29353 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.16■□□□□ 0.34
SHC1P29353 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHC1P29353 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHC1P29353 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SHC1P29353 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.16■□□□□ 0.34
SHC1P29353 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHC1P29353 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.16■□□□□ 0.34
SHC1P29353 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHC1P29353 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHC1P29353 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.16■□□□□ 0.34
SHC1P29353 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHC1P29353 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
SHC1P29353 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHC1P29353 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHC1P29353 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SHC1P29353 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SHC1P29353 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SHC1P29353 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHC1P29353 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHC1P29353 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.16■□□□□ 0.34
SHC1P29353 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHC1P29353 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHC1P29353 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHC1P29353 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHC1P29353 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHC1P29353 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHC1P29353 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHC1P29353 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHC1P29353 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SHC1P29353 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.15■□□□□ 0.34
SHC1P29353 AL390961.4-201ENST00000623958 2535 ntBASIC17.15■□□□□ 0.34
SHC1P29353 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SHC1P29353 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.15■□□□□ 0.34
SHC1P29353 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.15■□□□□ 0.34
SHC1P29353 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SHC1P29353 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHC1P29353 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.15■□□□□ 0.34
SHC1P29353 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.15■□□□□ 0.34
SHC1P29353 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SHC1P29353 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.15■□□□□ 0.34
SHC1P29353 PRSS44-201ENST00000515154 1146 ntBASIC17.15■□□□□ 0.34
SHC1P29353 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.15■□□□□ 0.34
SHC1P29353 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.15■□□□□ 0.34
SHC1P29353 AP005242.2-201ENST00000580065 1175 ntBASIC17.15■□□□□ 0.34
SHC1P29353 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.15■□□□□ 0.34
SHC1P29353 CYP2D8P-201ENST00000433633 1490 ntBASIC17.15■□□□□ 0.34
SHC1P29353 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
SHC1P29353 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHC1P29353 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHC1P29353 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHC1P29353 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SHC1P29353 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHC1P29353 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHC1P29353 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHC1P29353 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
SHC1P29353 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.15■□□□□ 0.34
SHC1P29353 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHC1P29353 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SHC1P29353 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHC1P29353 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
SHC1P29353 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.34
SHC1P29353 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.14■□□□□ 0.33
SHC1P29353 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHC1P29353 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SHC1P29353 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHC1P29353 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.14■□□□□ 0.33
SHC1P29353 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHC1P29353 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SHC1P29353 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHC1P29353 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SHC1P29353 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHC1P29353 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.14■□□□□ 0.33
SHC1P29353 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHC1P29353 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.14■□□□□ 0.33
SHC1P29353 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.14■□□□□ 0.33
SHC1P29353 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHC1P29353 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.14■□□□□ 0.33
SHC1P29353 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.14■□□□□ 0.33
SHC1P29353 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHC1P29353 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.14■□□□□ 0.33
SHC1P29353 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHC1P29353 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHC1P29353 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SHC1P29353 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.14■□□□□ 0.33
SHC1P29353 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.14■□□□□ 0.33
SHC1P29353 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.14■□□□□ 0.33
SHC1P29353 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.14■□□□□ 0.33
SHC1P29353 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SHC1P29353 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHC1P29353 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.13■□□□□ 0.33
SHC1P29353 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.13■□□□□ 0.33
SHC1P29353 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.13■□□□□ 0.33
SHC1P29353 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.13■□□□□ 0.33
SHC1P29353 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms