Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
MMP8P22894 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.69■□□□□ 0.74
MMP8P22894 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
MMP8P22894 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MMP8P22894 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MMP8P22894 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MMP8P22894 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MMP8P22894 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MMP8P22894 AL596275.1-201ENST00000423464 877 ntBASIC19.69■□□□□ 0.74
MMP8P22894 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.69■□□□□ 0.74
MMP8P22894 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.69■□□□□ 0.74
MMP8P22894 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MMP8P22894 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MMP8P22894 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
MMP8P22894 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.69■□□□□ 0.74
MMP8P22894 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
MMP8P22894 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.69■□□□□ 0.74
MMP8P22894 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MMP8P22894 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
MMP8P22894 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
MMP8P22894 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
MMP8P22894 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.68■□□□□ 0.74
MMP8P22894 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.68■□□□□ 0.74
MMP8P22894 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.68■□□□□ 0.74
MMP8P22894 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.68■□□□□ 0.74
MMP8P22894 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
MMP8P22894 TSPY14P-201ENST00000303979 915 ntBASIC19.68■□□□□ 0.74
MMP8P22894 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.68■□□□□ 0.74
MMP8P22894 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.68■□□□□ 0.74
MMP8P22894 CCR12P-201ENST00000446203 998 ntBASIC19.68■□□□□ 0.74
MMP8P22894 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
MMP8P22894 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MMP8P22894 MIR3180-5-201ENST00000583743 153 ntBASIC19.68■□□□□ 0.74
MMP8P22894 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MMP8P22894 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.68■□□□□ 0.74
MMP8P22894 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.68■□□□□ 0.74
MMP8P22894 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MMP8P22894 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MMP8P22894 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MMP8P22894 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
MMP8P22894 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
MMP8P22894 KRT8P9-201ENST00000558927 1449 ntBASIC19.68■□□□□ 0.74
MMP8P22894 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
MMP8P22894 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
MMP8P22894 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
MMP8P22894 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.67■□□□□ 0.74
MMP8P22894 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.67■□□□□ 0.74
MMP8P22894 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
MMP8P22894 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
MMP8P22894 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MMP8P22894 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MMP8P22894 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
MMP8P22894 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MMP8P22894 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
MMP8P22894 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.67■□□□□ 0.74
MMP8P22894 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.67■□□□□ 0.74
MMP8P22894 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.67■□□□□ 0.74
MMP8P22894 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.67■□□□□ 0.74
MMP8P22894 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.67■□□□□ 0.74
MMP8P22894 C2orf69P3-201ENST00000565542 1120 ntBASIC19.67■□□□□ 0.74
MMP8P22894 AC116562.4-202ENST00000641738 218 ntBASIC19.67■□□□□ 0.74
MMP8P22894 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
MMP8P22894 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MMP8P22894 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
MMP8P22894 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.67■□□□□ 0.74
MMP8P22894 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MMP8P22894 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.67■□□□□ 0.74
MMP8P22894 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MMP8P22894 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
MMP8P22894 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MMP8P22894 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MMP8P22894 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MMP8P22894 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MMP8P22894 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.66■□□□□ 0.74
MMP8P22894 AC007663.1-201ENST00000438948 1240 ntBASIC19.66■□□□□ 0.74
MMP8P22894 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MMP8P22894 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MMP8P22894 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.66■□□□□ 0.74
MMP8P22894 BX088651.1-201ENST00000540551 451 ntBASIC19.66■□□□□ 0.74
MMP8P22894 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MMP8P22894 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MMP8P22894 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MMP8P22894 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MMP8P22894 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MMP8P22894 BICD1-207ENST00000551848 1962 ntBASIC19.66■□□□□ 0.74
MMP8P22894 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
MMP8P22894 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MMP8P22894 CYP2D8P-201ENST00000433633 1490 ntBASIC19.66■□□□□ 0.74
MMP8P22894 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
MMP8P22894 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.66■□□□□ 0.74
MMP8P22894 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MMP8P22894 AC034236.2-201ENST00000606662 1610 ntBASIC19.65■□□□□ 0.74
MMP8P22894 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MMP8P22894 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
MMP8P22894 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.65■□□□□ 0.74
MMP8P22894 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
MMP8P22894 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MMP8P22894 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MMP8P22894 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MMP8P22894 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms