Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB3BP20337 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB3BP20337 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.41■□□□□ 0.22
RAB3BP20337 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC16.41■□□□□ 0.22
RAB3BP20337 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB3BP20337 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB3BP20337 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB3BP20337 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB3BP20337 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.41■□□□□ 0.22
RAB3BP20337 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB3BP20337 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB3BP20337 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RAB3BP20337 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB3BP20337 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB3BP20337 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB3BP20337 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB3BP20337 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB3BP20337 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAB3BP20337 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB3BP20337 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAB3BP20337 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAB3BP20337 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB3BP20337 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB3BP20337 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB3BP20337 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3BP20337 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3BP20337 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3BP20337 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3BP20337 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.4■□□□□ 0.22
RAB3BP20337 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3BP20337 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB3BP20337 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3BP20337 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3BP20337 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RAB3BP20337 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB3BP20337 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.4■□□□□ 0.22
RAB3BP20337 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3BP20337 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3BP20337 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.4■□□□□ 0.22
RAB3BP20337 SLC25A6P5-201ENST00000435663 894 ntBASIC16.4■□□□□ 0.22
RAB3BP20337 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RAB3BP20337 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.4■□□□□ 0.22
RAB3BP20337 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB3BP20337 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3BP20337 AC006557.6-201ENST00000623071 864 ntBASIC16.4■□□□□ 0.22
RAB3BP20337 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.4■□□□□ 0.22
RAB3BP20337 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3BP20337 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
RAB3BP20337 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3BP20337 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
RAB3BP20337 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3BP20337 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3BP20337 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3BP20337 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
RAB3BP20337 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3BP20337 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3BP20337 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.39■□□□□ 0.21
RAB3BP20337 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3BP20337 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.39■□□□□ 0.21
RAB3BP20337 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3BP20337 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RAB3BP20337 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
RAB3BP20337 AL499627.1-201ENST00000569373 2188 ntBASIC16.39■□□□□ 0.21
RAB3BP20337 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.39■□□□□ 0.21
RAB3BP20337 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3BP20337 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
RAB3BP20337 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.39■□□□□ 0.21
RAB3BP20337 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3BP20337 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.39■□□□□ 0.21
RAB3BP20337 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RAB3BP20337 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16.39■□□□□ 0.21
RAB3BP20337 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3BP20337 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3BP20337 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC16.39■□□□□ 0.21
RAB3BP20337 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RAB3BP20337 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3BP20337 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.39■□□□□ 0.21
RAB3BP20337 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3BP20337 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RAB3BP20337 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3BP20337 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3BP20337 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.39■□□□□ 0.21
RAB3BP20337 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RAB3BP20337 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
RAB3BP20337 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RAB3BP20337 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3BP20337 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3BP20337 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
RAB3BP20337 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.39■□□□□ 0.21
RAB3BP20337 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB3BP20337 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.38■□□□□ 0.21
RAB3BP20337 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB3BP20337 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.38■□□□□ 0.21
RAB3BP20337 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB3BP20337 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RAB3BP20337 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.38■□□□□ 0.21
RAB3BP20337 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB3BP20337 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.38■□□□□ 0.21
RAB3BP20337 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.38■□□□□ 0.21
RAB3BP20337 ZNRF2P3-201ENST00000424200 374 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms