Protein–RNA interactions for Protein: P20248

CCNA2, Cyclin-A2, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2P20248 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNA2P20248 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.65■□□□□ 0.42
CCNA2P20248 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CCNA2P20248 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNA2P20248 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.65■□□□□ 0.42
CCNA2P20248 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CCNA2P20248 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.65■□□□□ 0.42
CCNA2P20248 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.65■□□□□ 0.42
CCNA2P20248 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNA2P20248 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNA2P20248 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.65■□□□□ 0.42
CCNA2P20248 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.65■□□□□ 0.42
CCNA2P20248 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.65■□□□□ 0.42
CCNA2P20248 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.65■□□□□ 0.42
CCNA2P20248 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.65■□□□□ 0.42
CCNA2P20248 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNA2P20248 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CCNA2P20248 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNA2P20248 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNA2P20248 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNA2P20248 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCNA2P20248 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCNA2P20248 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCNA2P20248 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCNA2P20248 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCNA2P20248 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCNA2P20248 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCNA2P20248 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCNA2P20248 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCNA2P20248 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CCNA2P20248 AC239809.2-201ENST00000415381 517 ntBASIC17.64■□□□□ 0.41
CCNA2P20248 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCNA2P20248 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.64■□□□□ 0.41
CCNA2P20248 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CCNA2P20248 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.64■□□□□ 0.41
CCNA2P20248 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.64■□□□□ 0.41
CCNA2P20248 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCNA2P20248 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.64■□□□□ 0.41
CCNA2P20248 OR6D1P-202ENST00000641007 5290 ntBASIC17.64■□□□□ 0.41
CCNA2P20248 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCNA2P20248 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCNA2P20248 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCNA2P20248 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CCNA2P20248 KRT8P8-201ENST00000434750 1448 ntBASIC17.64■□□□□ 0.41
CCNA2P20248 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCNA2P20248 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCNA2P20248 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCNA2P20248 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CCNA2P20248 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CCNA2P20248 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CCNA2P20248 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCNA2P20248 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCNA2P20248 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCNA2P20248 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCNA2P20248 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.63■□□□□ 0.41
CCNA2P20248 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.63■□□□□ 0.41
CCNA2P20248 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCNA2P20248 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.63■□□□□ 0.41
CCNA2P20248 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCNA2P20248 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCNA2P20248 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCNA2P20248 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.63■□□□□ 0.41
CCNA2P20248 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
CCNA2P20248 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCNA2P20248 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.62■□□□□ 0.41
CCNA2P20248 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
CCNA2P20248 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.62■□□□□ 0.41
CCNA2P20248 AC093525.10-201ENST00000625130 1569 ntBASIC17.62■□□□□ 0.41
CCNA2P20248 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.62■□□□□ 0.41
CCNA2P20248 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCNA2P20248 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCNA2P20248 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCNA2P20248 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CCNA2P20248 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCNA2P20248 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCNA2P20248 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCNA2P20248 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.62■□□□□ 0.41
CCNA2P20248 KRT18P16-201ENST00000510337 1294 ntBASIC17.62■□□□□ 0.41
CCNA2P20248 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.62■□□□□ 0.41
CCNA2P20248 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
CCNA2P20248 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.62■□□□□ 0.41
CCNA2P20248 C1QBPP2-201ENST00000528754 825 ntBASIC17.62■□□□□ 0.41
CCNA2P20248 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.62■□□□□ 0.41
CCNA2P20248 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CCNA2P20248 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCNA2P20248 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCNA2P20248 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCNA2P20248 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
CCNA2P20248 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCNA2P20248 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.62■□□□□ 0.41
CCNA2P20248 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.62■□□□□ 0.41
CCNA2P20248 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCNA2P20248 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CCNA2P20248 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CCNA2P20248 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CCNA2P20248 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CCNA2P20248 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
CCNA2P20248 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCNA2P20248 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CCNA2P20248 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms