Protein–RNA interactions for Protein: P19474

TRIM21, E3 ubiquitin-protein ligase TRIM21, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM21P19474 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM21P19474 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
TRIM21P19474 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.67■□□□□ 0.9
TRIM21P19474 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.67■□□□□ 0.9
TRIM21P19474 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.67■□□□□ 0.9
TRIM21P19474 AL031985.4-201ENST00000642138 673 ntBASIC20.67■□□□□ 0.9
TRIM21P19474 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM21P19474 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.67■□□□□ 0.9
TRIM21P19474 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM21P19474 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
TRIM21P19474 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM21P19474 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.67■□□□□ 0.9
TRIM21P19474 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM21P19474 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
TRIM21P19474 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM21P19474 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM21P19474 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM21P19474 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM21P19474 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.66■□□□□ 0.9
TRIM21P19474 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIM21P19474 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TRIM21P19474 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
TRIM21P19474 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TRIM21P19474 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIM21P19474 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM21P19474 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.66■□□□□ 0.9
TRIM21P19474 AL160286.2-201ENST00000567150 934 ntBASIC20.66■□□□□ 0.9
TRIM21P19474 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.66■□□□□ 0.9
TRIM21P19474 MIR4785-201ENST00000585005 73 ntBASIC20.66■□□□□ 0.9
TRIM21P19474 CD177P1-201ENST00000606252 935 ntBASIC20.66■□□□□ 0.9
TRIM21P19474 KRT17P2-201ENST00000300992 1314 ntBASIC20.66■□□□□ 0.9
TRIM21P19474 AC079598.2-202ENST00000546624 1451 ntBASIC20.66■□□□□ 0.9
TRIM21P19474 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM21P19474 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM21P19474 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM21P19474 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM21P19474 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TRIM21P19474 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM21P19474 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM21P19474 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM21P19474 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM21P19474 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM21P19474 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM21P19474 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM21P19474 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.65■□□□□ 0.9
TRIM21P19474 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.65■□□□□ 0.9
TRIM21P19474 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM21P19474 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM21P19474 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.65■□□□□ 0.9
TRIM21P19474 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM21P19474 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.65■□□□□ 0.9
TRIM21P19474 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.65■□□□□ 0.9
TRIM21P19474 AC026271.3-201ENST00000571884 352 ntBASIC20.65■□□□□ 0.9
TRIM21P19474 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.65■□□□□ 0.9
TRIM21P19474 CR392000.1-201ENST00000624770 1228 ntBASIC20.65■□□□□ 0.9
TRIM21P19474 HLA-A-209ENST00000638375 975 ntBASIC20.65■□□□□ 0.9
TRIM21P19474 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM21P19474 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM21P19474 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TRIM21P19474 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM21P19474 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM21P19474 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM21P19474 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM21P19474 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM21P19474 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM21P19474 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TRIM21P19474 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.64■□□□□ 0.9
TRIM21P19474 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TRIM21P19474 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRIM21P19474 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.64■□□□□ 0.9
TRIM21P19474 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
TRIM21P19474 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRIM21P19474 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRIM21P19474 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TRIM21P19474 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRIM21P19474 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.64■□□□□ 0.9
TRIM21P19474 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TRIM21P19474 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRIM21P19474 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.64■□□□□ 0.89
TRIM21P19474 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM21P19474 AC018470.1-201ENST00000624790 3129 ntBASIC20.64■□□□□ 0.89
TRIM21P19474 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.64■□□□□ 0.89
TRIM21P19474 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.64■□□□□ 0.89
TRIM21P19474 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.64■□□□□ 0.89
TRIM21P19474 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM21P19474 AL355355.2-201ENST00000442321 338 ntBASIC20.64■□□□□ 0.89
TRIM21P19474 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.64■□□□□ 0.89
TRIM21P19474 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.64■□□□□ 0.89
TRIM21P19474 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.64■□□□□ 0.89
TRIM21P19474 Z99916.2-201ENST00000604037 246 ntBASIC20.64■□□□□ 0.89
TRIM21P19474 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.64■□□□□ 0.89
TRIM21P19474 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.64■□□□□ 0.89
TRIM21P19474 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM21P19474 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.64■□□□□ 0.89
TRIM21P19474 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM21P19474 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.64■□□□□ 0.89
TRIM21P19474 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TRIM21P19474 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM21P19474 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.64■□□□□ 0.89
TRIM21P19474 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms