Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.64■□□□□ 0.73
PDGFRAP16234 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDGFRAP16234 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDGFRAP16234 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDGFRAP16234 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
PDGFRAP16234 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDGFRAP16234 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDGFRAP16234 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDGFRAP16234 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDGFRAP16234 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDGFRAP16234 AL357033.4-201ENST00000617703 1807 ntBASIC19.63■□□□□ 0.73
PDGFRAP16234 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDGFRAP16234 AL109659.2-201ENST00000606809 1674 ntBASIC19.63■□□□□ 0.73
PDGFRAP16234 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDGFRAP16234 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.63■□□□□ 0.73
PDGFRAP16234 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDGFRAP16234 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.63■□□□□ 0.73
PDGFRAP16234 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDGFRAP16234 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDGFRAP16234 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.63■□□□□ 0.73
PDGFRAP16234 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PDGFRAP16234 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDGFRAP16234 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PDGFRAP16234 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PDGFRAP16234 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDGFRAP16234 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PDGFRAP16234 AC008556.1-201ENST00000610908 2040 ntBASIC19.63■□□□□ 0.73
PDGFRAP16234 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDGFRAP16234 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDGFRAP16234 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDGFRAP16234 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDGFRAP16234 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDGFRAP16234 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PDGFRAP16234 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PDGFRAP16234 WIZP1-201ENST00000531444 2299 ntBASIC19.62■□□□□ 0.73
PDGFRAP16234 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.62■□□□□ 0.73
PDGFRAP16234 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDGFRAP16234 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.62■□□□□ 0.73
PDGFRAP16234 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.62■□□□□ 0.73
PDGFRAP16234 TSPY17P-201ENST00000450329 467 ntBASIC19.62■□□□□ 0.73
PDGFRAP16234 AL353719.1-201ENST00000566847 864 ntBASIC19.62■□□□□ 0.73
PDGFRAP16234 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
PDGFRAP16234 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDGFRAP16234 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.62■□□□□ 0.73
PDGFRAP16234 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDGFRAP16234 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PDGFRAP16234 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.62■□□□□ 0.73
PDGFRAP16234 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDGFRAP16234 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.62■□□□□ 0.73
PDGFRAP16234 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDGFRAP16234 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDGFRAP16234 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDGFRAP16234 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PDGFRAP16234 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.62■□□□□ 0.73
PDGFRAP16234 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDGFRAP16234 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.62■□□□□ 0.73
PDGFRAP16234 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.62■□□□□ 0.73
PDGFRAP16234 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDGFRAP16234 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDGFRAP16234 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PDGFRAP16234 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDGFRAP16234 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.61■□□□□ 0.73
PDGFRAP16234 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDGFRAP16234 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDGFRAP16234 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDGFRAP16234 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDGFRAP16234 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDGFRAP16234 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.61■□□□□ 0.73
PDGFRAP16234 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.61■□□□□ 0.73
PDGFRAP16234 CCR12P-201ENST00000446203 998 ntBASIC19.61■□□□□ 0.73
PDGFRAP16234 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.61■□□□□ 0.73
PDGFRAP16234 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.61■□□□□ 0.73
PDGFRAP16234 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.61■□□□□ 0.73
PDGFRAP16234 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.61■□□□□ 0.73
PDGFRAP16234 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.61■□□□□ 0.73
PDGFRAP16234 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.61■□□□□ 0.73
PDGFRAP16234 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.61■□□□□ 0.73
PDGFRAP16234 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDGFRAP16234 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDGFRAP16234 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDGFRAP16234 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PDGFRAP16234 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDGFRAP16234 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDGFRAP16234 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.61■□□□□ 0.73
PDGFRAP16234 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDGFRAP16234 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PDGFRAP16234 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.61■□□□□ 0.73
PDGFRAP16234 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDGFRAP16234 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.6■□□□□ 0.73
PDGFRAP16234 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDGFRAP16234 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.6■□□□□ 0.73
PDGFRAP16234 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDGFRAP16234 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDGFRAP16234 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PDGFRAP16234 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDGFRAP16234 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDGFRAP16234 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.6■□□□□ 0.73
PDGFRAP16234 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
PDGFRAP16234 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDGFRAP16234 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms