Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
SCG2P13521 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
SCG2P13521 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.52■■□□□ 1.03
SCG2P13521 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
SCG2P13521 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SCG2P13521 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
SCG2P13521 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
SCG2P13521 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCG2P13521 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SCG2P13521 AL499627.1-201ENST00000569373 2188 ntBASIC21.51■■□□□ 1.03
SCG2P13521 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCG2P13521 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCG2P13521 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCG2P13521 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.51■■□□□ 1.03
SCG2P13521 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SCG2P13521 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCG2P13521 LIN28AP1-201ENST00000429574 405 ntBASIC21.51■■□□□ 1.03
SCG2P13521 KRT18P41-201ENST00000518924 1277 ntBASIC21.51■■□□□ 1.03
SCG2P13521 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.51■■□□□ 1.03
SCG2P13521 AL445228.2-201ENST00000605589 952 ntBASIC21.51■■□□□ 1.03
SCG2P13521 AC141257.4-201ENST00000634557 245 ntBASIC21.51■■□□□ 1.03
SCG2P13521 AC136944.6-201ENST00000634818 245 ntBASIC21.51■■□□□ 1.03
SCG2P13521 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCG2P13521 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SCG2P13521 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SCG2P13521 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.51■■□□□ 1.03
SCG2P13521 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCG2P13521 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCG2P13521 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.51■■□□□ 1.03
SCG2P13521 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SCG2P13521 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.51■■□□□ 1.03
SCG2P13521 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCG2P13521 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCG2P13521 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.5■■□□□ 1.03
SCG2P13521 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SCG2P13521 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCG2P13521 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCG2P13521 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SCG2P13521 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCG2P13521 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
SCG2P13521 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCG2P13521 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.5■■□□□ 1.03
SCG2P13521 ATP5G1P1-201ENST00000448724 379 ntBASIC21.5■■□□□ 1.03
SCG2P13521 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCG2P13521 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.5■■□□□ 1.03
SCG2P13521 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.5■■□□□ 1.03
SCG2P13521 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.5■■□□□ 1.03
SCG2P13521 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
SCG2P13521 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SCG2P13521 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SCG2P13521 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCG2P13521 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SCG2P13521 AL138781.2-201ENST00000617896 1843 ntBASIC21.5■■□□□ 1.03
SCG2P13521 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SCG2P13521 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCG2P13521 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCG2P13521 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCG2P13521 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SCG2P13521 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SCG2P13521 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SCG2P13521 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC21.49■■□□□ 1.03
SCG2P13521 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SCG2P13521 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
SCG2P13521 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
SCG2P13521 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SCG2P13521 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SCG2P13521 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.49■■□□□ 1.03
SCG2P13521 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.49■■□□□ 1.03
SCG2P13521 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.49■■□□□ 1.03
SCG2P13521 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.49■■□□□ 1.03
SCG2P13521 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SCG2P13521 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.49■■□□□ 1.03
SCG2P13521 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
SCG2P13521 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.49■■□□□ 1.03
SCG2P13521 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.49■■□□□ 1.03
SCG2P13521 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
SCG2P13521 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SCG2P13521 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
SCG2P13521 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SCG2P13521 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.49■■□□□ 1.03
SCG2P13521 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SCG2P13521 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SCG2P13521 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SCG2P13521 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SCG2P13521 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
SCG2P13521 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SCG2P13521 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SCG2P13521 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SCG2P13521 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SCG2P13521 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SCG2P13521 HOXB1-202ENST00000577092 1414 ntBASIC21.48■■□□□ 1.03
SCG2P13521 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.48■■□□□ 1.03
SCG2P13521 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.48■■□□□ 1.03
SCG2P13521 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
SCG2P13521 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
SCG2P13521 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.48■■□□□ 1.03
SCG2P13521 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SCG2P13521 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SCG2P13521 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.48■■□□□ 1.03
SCG2P13521 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms