Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHRNB1P11230 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.96■□□□□ 0.63
CHRNB1P11230 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHRNB1P11230 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHRNB1P11230 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHRNB1P11230 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.96■□□□□ 0.63
CHRNB1P11230 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.96■□□□□ 0.63
CHRNB1P11230 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.96■□□□□ 0.63
CHRNB1P11230 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
CHRNB1P11230 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.96■□□□□ 0.63
CHRNB1P11230 AP003733.1-201ENST00000491725 852 ntBASIC18.96■□□□□ 0.63
CHRNB1P11230 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.96■□□□□ 0.63
CHRNB1P11230 AL662844.1-201ENST00000546340 181 ntBASIC18.96■□□□□ 0.63
CHRNB1P11230 AC074051.2-201ENST00000565115 352 ntBASIC18.96■□□□□ 0.63
CHRNB1P11230 AL121912.1-201ENST00000603683 238 ntBASIC18.96■□□□□ 0.63
CHRNB1P11230 IGHV3-41-201ENST00000613121 348 ntBASIC18.96■□□□□ 0.63
CHRNB1P11230 HOXB1-202ENST00000577092 1414 ntBASIC18.96■□□□□ 0.63
CHRNB1P11230 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHRNB1P11230 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHRNB1P11230 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CHRNB1P11230 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNB1P11230 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.95■□□□□ 0.62
CHRNB1P11230 AC008556.1-201ENST00000610908 2040 ntBASIC18.95■□□□□ 0.62
CHRNB1P11230 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CHRNB1P11230 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNB1P11230 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.95■□□□□ 0.62
CHRNB1P11230 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNB1P11230 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNB1P11230 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.95■□□□□ 0.62
CHRNB1P11230 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.95■□□□□ 0.62
CHRNB1P11230 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNB1P11230 MRPL3P1-201ENST00000400109 1033 ntBASIC18.95■□□□□ 0.62
CHRNB1P11230 KRT16P4-201ENST00000453883 522 ntBASIC18.95■□□□□ 0.62
CHRNB1P11230 AC079776.4-201ENST00000511039 504 ntBASIC18.95■□□□□ 0.62
CHRNB1P11230 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNB1P11230 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
CHRNB1P11230 AC138894.3-201ENST00000603787 634 ntBASIC18.95■□□□□ 0.62
CHRNB1P11230 AL353801.3-201ENST00000609898 542 ntBASIC18.95■□□□□ 0.62
CHRNB1P11230 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNB1P11230 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNB1P11230 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CHRNB1P11230 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.95■□□□□ 0.62
CHRNB1P11230 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.95■□□□□ 0.62
CHRNB1P11230 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.95■□□□□ 0.62
CHRNB1P11230 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNB1P11230 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.95■□□□□ 0.62
CHRNB1P11230 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNB1P11230 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNB1P11230 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNB1P11230 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNB1P11230 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNB1P11230 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNB1P11230 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.94■□□□□ 0.62
CHRNB1P11230 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNB1P11230 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNB1P11230 AC233702.3-201ENST00000578656 1387 ntBASIC18.94■□□□□ 0.62
CHRNB1P11230 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNB1P11230 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.94■□□□□ 0.62
CHRNB1P11230 TCF3P1-201ENST00000423021 1937 ntBASIC18.94■□□□□ 0.62
CHRNB1P11230 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.94■□□□□ 0.62
CHRNB1P11230 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.94■□□□□ 0.62
CHRNB1P11230 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CHRNB1P11230 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNB1P11230 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNB1P11230 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNB1P11230 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNB1P11230 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.94■□□□□ 0.62
CHRNB1P11230 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNB1P11230 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.94■□□□□ 0.62
CHRNB1P11230 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.94■□□□□ 0.62
CHRNB1P11230 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNB1P11230 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNB1P11230 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNB1P11230 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNB1P11230 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNB1P11230 RCC2P3-201ENST00000418112 1537 ntBASIC18.94■□□□□ 0.62
CHRNB1P11230 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.94■□□□□ 0.62
CHRNB1P11230 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNB1P11230 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNB1P11230 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.93■□□□□ 0.62
CHRNB1P11230 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNB1P11230 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNB1P11230 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNB1P11230 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNB1P11230 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNB1P11230 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNB1P11230 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNB1P11230 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNB1P11230 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.93■□□□□ 0.62
CHRNB1P11230 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.93■□□□□ 0.62
CHRNB1P11230 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.93■□□□□ 0.62
CHRNB1P11230 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNB1P11230 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
CHRNB1P11230 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.93■□□□□ 0.62
CHRNB1P11230 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNB1P11230 AL512353.2-201ENST00000448759 1962 ntBASIC18.93■□□□□ 0.62
CHRNB1P11230 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNB1P11230 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNB1P11230 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.93■□□□□ 0.62
CHRNB1P11230 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms