Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC175P0C221 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC175P0C221 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CCDC175P0C221 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC175P0C221 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC175P0C221 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC175P0C221 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CCDC175P0C221 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CCDC175P0C221 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC175P0C221 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.22■□□□□ 0.83
CCDC175P0C221 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC175P0C221 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC175P0C221 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
CCDC175P0C221 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.22■□□□□ 0.83
CCDC175P0C221 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.22■□□□□ 0.83
CCDC175P0C221 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC175P0C221 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.22■□□□□ 0.83
CCDC175P0C221 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC175P0C221 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC175P0C221 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC175P0C221 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC175P0C221 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC175P0C221 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC175P0C221 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC175P0C221 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC175P0C221 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC175P0C221 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC175P0C221 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC175P0C221 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
CCDC175P0C221 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC175P0C221 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC175P0C221 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC175P0C221 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CCDC175P0C221 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.21■□□□□ 0.83
CCDC175P0C221 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC175P0C221 AC004911.1-201ENST00000416316 871 ntBASIC20.21■□□□□ 0.83
CCDC175P0C221 DUSP5P2-201ENST00000426873 1033 ntBASIC20.21■□□□□ 0.83
CCDC175P0C221 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.21■□□□□ 0.83
CCDC175P0C221 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.21■□□□□ 0.83
CCDC175P0C221 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC175P0C221 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC175P0C221 AL121829.2-201ENST00000620908 328 ntBASIC20.21■□□□□ 0.83
CCDC175P0C221 MYC-208ENST00000641036 567 ntBASIC20.21■□□□□ 0.83
CCDC175P0C221 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.21■□□□□ 0.83
CCDC175P0C221 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC175P0C221 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC175P0C221 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CCDC175P0C221 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC175P0C221 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC175P0C221 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC175P0C221 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC175P0C221 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CCDC175P0C221 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC175P0C221 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CCDC175P0C221 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC175P0C221 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC175P0C221 AC139713.2-201ENST00000641328 2723 ntBASIC20.2■□□□□ 0.82
CCDC175P0C221 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC175P0C221 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC175P0C221 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC175P0C221 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC175P0C221 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC175P0C221 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC175P0C221 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC175P0C221 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC175P0C221 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC175P0C221 SLC25A6P5-201ENST00000435663 894 ntBASIC20.2■□□□□ 0.82
CCDC175P0C221 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.2■□□□□ 0.82
CCDC175P0C221 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.2■□□□□ 0.82
CCDC175P0C221 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC175P0C221 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC175P0C221 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC175P0C221 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC175P0C221 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC175P0C221 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC175P0C221 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC175P0C221 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC175P0C221 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC175P0C221 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC175P0C221 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC175P0C221 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CCDC175P0C221 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC175P0C221 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC175P0C221 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CCDC175P0C221 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC175P0C221 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CCDC175P0C221 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC175P0C221 AL160286.2-201ENST00000567150 934 ntBASIC20.19■□□□□ 0.82
CCDC175P0C221 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC175P0C221 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.19■□□□□ 0.82
CCDC175P0C221 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC175P0C221 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CCDC175P0C221 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC175P0C221 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC175P0C221 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC175P0C221 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC175P0C221 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC175P0C221 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.19■□□□□ 0.82
CCDC175P0C221 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC175P0C221 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms