Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
TPM1P09493 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TPM1P09493 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TPM1P09493 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.63■□□□□ 0.89
TPM1P09493 SLC29A4P1-201ENST00000398760 971 ntBASIC20.63■□□□□ 0.89
TPM1P09493 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.63■□□□□ 0.89
TPM1P09493 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.63■□□□□ 0.89
TPM1P09493 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.63■□□□□ 0.89
TPM1P09493 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.63■□□□□ 0.89
TPM1P09493 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.63■□□□□ 0.89
TPM1P09493 PNMA6B-201ENST00000538162 1200 ntBASIC20.63■□□□□ 0.89
TPM1P09493 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.63■□□□□ 0.89
TPM1P09493 AC060766.5-201ENST00000590539 871 ntBASIC20.63■□□□□ 0.89
TPM1P09493 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.63■□□□□ 0.89
TPM1P09493 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.63■□□□□ 0.89
TPM1P09493 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TPM1P09493 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.63■□□□□ 0.89
TPM1P09493 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TPM1P09493 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TPM1P09493 AL162741.1-201ENST00000565563 1558 ntBASIC20.63■□□□□ 0.89
TPM1P09493 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TPM1P09493 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
TPM1P09493 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.63■□□□□ 0.89
TPM1P09493 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPM1P09493 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.62■□□□□ 0.89
TPM1P09493 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPM1P09493 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPM1P09493 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPM1P09493 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.62■□□□□ 0.89
TPM1P09493 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPM1P09493 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.62■□□□□ 0.89
TPM1P09493 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPM1P09493 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.62■□□□□ 0.89
TPM1P09493 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TPM1P09493 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.62■□□□□ 0.89
TPM1P09493 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TPM1P09493 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPM1P09493 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPM1P09493 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPM1P09493 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.62■□□□□ 0.89
TPM1P09493 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.62■□□□□ 0.89
TPM1P09493 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.62■□□□□ 0.89
TPM1P09493 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TPM1P09493 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
TPM1P09493 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPM1P09493 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPM1P09493 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TPM1P09493 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.62■□□□□ 0.89
TPM1P09493 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TPM1P09493 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPM1P09493 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TPM1P09493 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TPM1P09493 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.61■□□□□ 0.89
TPM1P09493 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TPM1P09493 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TPM1P09493 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
TPM1P09493 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
TPM1P09493 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TPM1P09493 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TPM1P09493 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TPM1P09493 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TPM1P09493 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.61■□□□□ 0.89
TPM1P09493 AC083906.2-201ENST00000511578 360 ntBASIC20.61■□□□□ 0.89
TPM1P09493 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
TPM1P09493 AC126763.1-201ENST00000552015 2118 ntBASIC20.61■□□□□ 0.89
TPM1P09493 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.61■□□□□ 0.89
TPM1P09493 MIR4758-201ENST00000577688 71 ntBASIC20.61■□□□□ 0.89
TPM1P09493 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.61■□□□□ 0.89
TPM1P09493 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.61■□□□□ 0.89
TPM1P09493 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.61■□□□□ 0.89
TPM1P09493 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.61■□□□□ 0.89
TPM1P09493 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TPM1P09493 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TPM1P09493 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
TPM1P09493 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TPM1P09493 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TPM1P09493 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.61■□□□□ 0.89
TPM1P09493 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TPM1P09493 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TPM1P09493 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TPM1P09493 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TPM1P09493 PRORSD1P-202ENST00000563365 2154 ntBASIC20.61■□□□□ 0.89
TPM1P09493 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TPM1P09493 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TPM1P09493 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TPM1P09493 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TPM1P09493 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TPM1P09493 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
TPM1P09493 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TPM1P09493 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TPM1P09493 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TPM1P09493 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TPM1P09493 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.6■□□□□ 0.89
TPM1P09493 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC20.6■□□□□ 0.89
TPM1P09493 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TPM1P09493 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TPM1P09493 AC006970.2-201ENST00000450065 779 ntBASIC20.6■□□□□ 0.89
TPM1P09493 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.6■□□□□ 0.89
TPM1P09493 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TPM1P09493 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms