Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
HMGN1P05114 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.98■□□□□ 0.31
HMGN1P05114 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HMGN1P05114 POM121L13P-201ENST00000422362 380 ntBASIC16.98■□□□□ 0.31
HMGN1P05114 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGN1P05114 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGN1P05114 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.98■□□□□ 0.31
HMGN1P05114 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGN1P05114 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGN1P05114 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.98■□□□□ 0.31
HMGN1P05114 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.98■□□□□ 0.31
HMGN1P05114 PCDHB18P-201ENST00000524813 2368 ntBASIC16.97■□□□□ 0.31
HMGN1P05114 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.97■□□□□ 0.31
HMGN1P05114 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.97■□□□□ 0.31
HMGN1P05114 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.97■□□□□ 0.31
HMGN1P05114 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGN1P05114 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.97■□□□□ 0.31
HMGN1P05114 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.97■□□□□ 0.31
HMGN1P05114 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
HMGN1P05114 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
HMGN1P05114 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HMGN1P05114 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGN1P05114 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGN1P05114 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.97■□□□□ 0.31
HMGN1P05114 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.97■□□□□ 0.31
HMGN1P05114 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.97■□□□□ 0.31
HMGN1P05114 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.97■□□□□ 0.31
HMGN1P05114 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.97■□□□□ 0.31
HMGN1P05114 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HMGN1P05114 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.97■□□□□ 0.31
HMGN1P05114 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HMGN1P05114 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGN1P05114 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGN1P05114 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HMGN1P05114 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGN1P05114 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGN1P05114 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.97■□□□□ 0.31
HMGN1P05114 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HMGN1P05114 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGN1P05114 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGN1P05114 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGN1P05114 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGN1P05114 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGN1P05114 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGN1P05114 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HMGN1P05114 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.96■□□□□ 0.31
HMGN1P05114 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.96■□□□□ 0.31
HMGN1P05114 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HMGN1P05114 KRT8P41-201ENST00000533985 1514 ntBASIC16.96■□□□□ 0.31
HMGN1P05114 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMGN1P05114 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HMGN1P05114 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMGN1P05114 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMGN1P05114 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMGN1P05114 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HMGN1P05114 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.96■□□□□ 0.31
HMGN1P05114 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HMGN1P05114 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.96■□□□□ 0.31
HMGN1P05114 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.96■□□□□ 0.31
HMGN1P05114 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.96■□□□□ 0.31
HMGN1P05114 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.96■□□□□ 0.31
HMGN1P05114 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.96■□□□□ 0.31
HMGN1P05114 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
HMGN1P05114 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMGN1P05114 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
HMGN1P05114 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMGN1P05114 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.96■□□□□ 0.31
HMGN1P05114 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMGN1P05114 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMGN1P05114 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMGN1P05114 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
HMGN1P05114 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
HMGN1P05114 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HMGN1P05114 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.96■□□□□ 0.3
HMGN1P05114 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.96■□□□□ 0.3
HMGN1P05114 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HMGN1P05114 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGN1P05114 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.95■□□□□ 0.3
HMGN1P05114 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGN1P05114 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
HMGN1P05114 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGN1P05114 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGN1P05114 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGN1P05114 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGN1P05114 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGN1P05114 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGN1P05114 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGN1P05114 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.95■□□□□ 0.3
HMGN1P05114 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.95■□□□□ 0.3
HMGN1P05114 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.95■□□□□ 0.3
HMGN1P05114 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGN1P05114 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
HMGN1P05114 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.95■□□□□ 0.3
HMGN1P05114 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.95■□□□□ 0.3
HMGN1P05114 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HMGN1P05114 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.95■□□□□ 0.3
HMGN1P05114 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.95■□□□□ 0.3
HMGN1P05114 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
HMGN1P05114 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.95■□□□□ 0.3
HMGN1P05114 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms