Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TCRAP04437 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC14.26□□□□□ -0.13
TCRAP04437 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC14.26□□□□□ -0.13
TCRAP04437 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC14.26□□□□□ -0.13
TCRAP04437 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC14.26□□□□□ -0.13
TCRAP04437 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TCRAP04437 MYC-208ENST00000641036 567 ntBASIC14.26□□□□□ -0.13
TCRAP04437 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRAP04437 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRAP04437 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRAP04437 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRAP04437 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC14.26□□□□□ -0.13
TCRAP04437 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRAP04437 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
TCRAP04437 AL499627.1-201ENST00000569373 2188 ntBASIC14.26□□□□□ -0.13
TCRAP04437 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRAP04437 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRAP04437 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRAP04437 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRAP04437 AC135776.1-201ENST00000319817 2481 ntBASIC14.25□□□□□ -0.13
TCRAP04437 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TCRAP04437 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.25□□□□□ -0.13
TCRAP04437 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRAP04437 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRAP04437 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC14.25□□□□□ -0.13
TCRAP04437 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TCRAP04437 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRAP04437 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRAP04437 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC14.25□□□□□ -0.13
TCRAP04437 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TCRAP04437 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.25□□□□□ -0.13
TCRAP04437 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRAP04437 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRAP04437 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC14.25□□□□□ -0.13
TCRAP04437 AC004911.1-201ENST00000416316 871 ntBASIC14.25□□□□□ -0.13
TCRAP04437 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TCRAP04437 DUSP5P2-201ENST00000426873 1033 ntBASIC14.25□□□□□ -0.13
TCRAP04437 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TCRAP04437 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC14.25□□□□□ -0.13
TCRAP04437 RHOD-202ENST00000532559 538 ntTSL 3 BASIC14.25□□□□□ -0.13
TCRAP04437 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC14.25□□□□□ -0.13
TCRAP04437 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TCRAP04437 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TCRAP04437 AL121829.2-201ENST00000620908 328 ntBASIC14.25□□□□□ -0.13
TCRAP04437 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC14.25□□□□□ -0.13
TCRAP04437 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14.25□□□□□ -0.13
TCRAP04437 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TCRAP04437 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TCRAP04437 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TCRAP04437 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.25□□□□□ -0.13
TCRAP04437 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC14.25□□□□□ -0.13
TCRAP04437 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC14.25□□□□□ -0.13
TCRAP04437 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRAP04437 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TCRAP04437 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRAP04437 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRAP04437 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRAP04437 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRAP04437 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRAP04437 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC14.25□□□□□ -0.13
TCRAP04437 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRAP04437 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRAP04437 AC134043.2-201ENST00000624206 2238 ntBASIC14.25□□□□□ -0.13
TCRAP04437 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRAP04437 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TCRAP04437 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC14.25□□□□□ -0.13
TCRAP04437 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRAP04437 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRAP04437 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TCRAP04437 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRAP04437 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRAP04437 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRAP04437 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRAP04437 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TCRAP04437 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRAP04437 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TCRAP04437 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
TCRAP04437 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRAP04437 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
TCRAP04437 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRAP04437 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.24□□□□□ -0.13
TCRAP04437 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRAP04437 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRAP04437 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
TCRAP04437 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRAP04437 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC14.24□□□□□ -0.13
TCRAP04437 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRAP04437 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TCRAP04437 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TCRAP04437 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC14.24□□□□□ -0.13
TCRAP04437 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC14.24□□□□□ -0.13
TCRAP04437 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC14.24□□□□□ -0.13
TCRAP04437 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TCRAP04437 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC14.24□□□□□ -0.13
TCRAP04437 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC14.24□□□□□ -0.13
TCRAP04437 AL160286.2-201ENST00000567150 934 ntBASIC14.24□□□□□ -0.13
TCRAP04437 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC14.24□□□□□ -0.13
TCRAP04437 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRAP04437 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TCRAP04437 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms