Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
GGPS1O95749 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GGPS1O95749 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
GGPS1O95749 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GGPS1O95749 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
GGPS1O95749 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
GGPS1O95749 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GGPS1O95749 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.99■□□□□ 0.95
GGPS1O95749 KRT8P7-201ENST00000533003 1432 ntBASIC20.99■□□□□ 0.95
GGPS1O95749 HOXB1-202ENST00000577092 1414 ntBASIC20.99■□□□□ 0.95
GGPS1O95749 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GGPS1O95749 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.99■□□□□ 0.95
GGPS1O95749 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GGPS1O95749 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.99■□□□□ 0.95
GGPS1O95749 KRT18P48-201ENST00000434763 852 ntBASIC20.99■□□□□ 0.95
GGPS1O95749 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GGPS1O95749 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.99■□□□□ 0.95
GGPS1O95749 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.99■□□□□ 0.95
GGPS1O95749 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
GGPS1O95749 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.99■□□□□ 0.95
GGPS1O95749 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
GGPS1O95749 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GGPS1O95749 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GGPS1O95749 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GGPS1O95749 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GGPS1O95749 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.98■□□□□ 0.95
GGPS1O95749 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.98■□□□□ 0.95
GGPS1O95749 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
GGPS1O95749 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GGPS1O95749 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.98■□□□□ 0.95
GGPS1O95749 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.98■□□□□ 0.95
GGPS1O95749 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
GGPS1O95749 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.98■□□□□ 0.95
GGPS1O95749 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.98■□□□□ 0.95
GGPS1O95749 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GGPS1O95749 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GGPS1O95749 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.98■□□□□ 0.95
GGPS1O95749 HLA-F-220ENST00000434407 884 ntBASIC20.98■□□□□ 0.95
GGPS1O95749 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.98■□□□□ 0.95
GGPS1O95749 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.98■□□□□ 0.95
GGPS1O95749 AC104390.1-201ENST00000555663 520 ntBASIC20.98■□□□□ 0.95
GGPS1O95749 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.98■□□□□ 0.95
GGPS1O95749 AL136038.4-201ENST00000603606 1261 ntBASIC20.98■□□□□ 0.95
GGPS1O95749 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.98■□□□□ 0.95
GGPS1O95749 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GGPS1O95749 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GGPS1O95749 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GGPS1O95749 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GGPS1O95749 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.98■□□□□ 0.95
GGPS1O95749 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GGPS1O95749 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GGPS1O95749 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
GGPS1O95749 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.97■□□□□ 0.95
GGPS1O95749 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
GGPS1O95749 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
GGPS1O95749 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.97■□□□□ 0.95
GGPS1O95749 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GGPS1O95749 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.97■□□□□ 0.95
GGPS1O95749 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
GGPS1O95749 ATP5G2P1-201ENST00000433580 426 ntBASIC20.97■□□□□ 0.95
GGPS1O95749 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.97■□□□□ 0.95
GGPS1O95749 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.97■□□□□ 0.95
GGPS1O95749 AC010240.3-201ENST00000607688 395 ntBASIC20.97■□□□□ 0.95
GGPS1O95749 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.97■□□□□ 0.95
GGPS1O95749 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GGPS1O95749 AC018445.3-201ENST00000624177 1945 ntBASIC20.97■□□□□ 0.95
GGPS1O95749 AL391807.1-203ENST00000604392 2365 ntBASIC20.97■□□□□ 0.95
GGPS1O95749 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GGPS1O95749 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
GGPS1O95749 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.97■□□□□ 0.95
GGPS1O95749 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GGPS1O95749 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
GGPS1O95749 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GGPS1O95749 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GGPS1O95749 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.96■□□□□ 0.95
GGPS1O95749 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GGPS1O95749 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.96■□□□□ 0.95
GGPS1O95749 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
GGPS1O95749 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
GGPS1O95749 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GGPS1O95749 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.96■□□□□ 0.95
GGPS1O95749 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GGPS1O95749 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
GGPS1O95749 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.96■□□□□ 0.95
GGPS1O95749 AC011498.5-201ENST00000592027 486 ntBASIC20.96■□□□□ 0.95
GGPS1O95749 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
GGPS1O95749 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GGPS1O95749 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GGPS1O95749 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GGPS1O95749 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.96■□□□□ 0.95
GGPS1O95749 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
GGPS1O95749 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.96■□□□□ 0.95
GGPS1O95749 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GGPS1O95749 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
GGPS1O95749 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.95■□□□□ 0.95
GGPS1O95749 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
GGPS1O95749 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.95■□□□□ 0.94
GGPS1O95749 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
GGPS1O95749 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.95■□□□□ 0.94
GGPS1O95749 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms