Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SIX6O95475 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIX6O95475 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SIX6O95475 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC15.69■□□□□ 0.1
SIX6O95475 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIX6O95475 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SIX6O95475 AP001330.3-201ENST00000520123 633 ntBASIC15.69■□□□□ 0.1
SIX6O95475 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC15.69■□□□□ 0.1
SIX6O95475 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIX6O95475 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SIX6O95475 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.69■□□□□ 0.1
SIX6O95475 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SIX6O95475 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC15.69■□□□□ 0.1
SIX6O95475 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SIX6O95475 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.69■□□□□ 0.1
SIX6O95475 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIX6O95475 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SIX6O95475 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIX6O95475 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIX6O95475 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIX6O95475 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIX6O95475 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SIX6O95475 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SIX6O95475 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIX6O95475 CICP6-201ENST00000457191 2729 ntBASIC15.68■□□□□ 0.1
SIX6O95475 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIX6O95475 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIX6O95475 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SIX6O95475 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SIX6O95475 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIX6O95475 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SIX6O95475 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.68■□□□□ 0.1
SIX6O95475 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.68■□□□□ 0.1
SIX6O95475 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SIX6O95475 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIX6O95475 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIX6O95475 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.68■□□□□ 0.1
SIX6O95475 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SIX6O95475 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIX6O95475 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC15.68■□□□□ 0.1
SIX6O95475 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIX6O95475 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
SIX6O95475 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SIX6O95475 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC15.68■□□□□ 0.1
SIX6O95475 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC15.68■□□□□ 0.1
SIX6O95475 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC15.68■□□□□ 0.1
SIX6O95475 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
SIX6O95475 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIX6O95475 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SIX6O95475 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SIX6O95475 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIX6O95475 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIX6O95475 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SIX6O95475 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIX6O95475 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.68■□□□□ 0.1
SIX6O95475 AC011676.5-201ENST00000624864 2660 ntBASIC15.68■□□□□ 0.1
SIX6O95475 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SIX6O95475 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
SIX6O95475 NKILA-202ENST00000614771 2598 ntBASIC15.68■□□□□ 0.1
SIX6O95475 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SIX6O95475 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIX6O95475 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SIX6O95475 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIX6O95475 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIX6O95475 ANKRD18DP-204ENST00000455355 1975 ntBASIC15.67■□□□□ 0.1
SIX6O95475 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIX6O95475 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIX6O95475 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.67■□□□□ 0.1
SIX6O95475 PP12613-201ENST00000424958 2230 ntBASIC15.67■□□□□ 0.1
SIX6O95475 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC15.67■□□□□ 0.1
SIX6O95475 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIX6O95475 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIX6O95475 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIX6O95475 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIX6O95475 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC15.67■□□□□ 0.1
SIX6O95475 RASA4CP-201ENST00000424092 1398 ntBASIC15.67■□□□□ 0.1
SIX6O95475 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.67■□□□□ 0.1
SIX6O95475 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIX6O95475 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIX6O95475 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SIX6O95475 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC15.67■□□□□ 0.1
SIX6O95475 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC15.67■□□□□ 0.1
SIX6O95475 MFSD11-216ENST00000590393 1141 ntBASIC15.67■□□□□ 0.1
SIX6O95475 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC15.67■□□□□ 0.1
SIX6O95475 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIX6O95475 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.67■□□□□ 0.1
SIX6O95475 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SIX6O95475 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SIX6O95475 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIX6O95475 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SIX6O95475 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SIX6O95475 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIX6O95475 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SIX6O95475 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIX6O95475 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SIX6O95475 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC15.67■□□□□ 0.1
SIX6O95475 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIX6O95475 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIX6O95475 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SIX6O95475 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms