Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC28A2O43868 AL161938.1-201ENST00000569833 2180 ntBASIC18.03■□□□□ 0.48
SLC28A2O43868 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC28A2O43868 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC28A2O43868 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC28A2O43868 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC28A2O43868 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC28A2O43868 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC28A2O43868 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC28A2O43868 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC28A2O43868 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC28A2O43868 KRT18P16-201ENST00000510337 1294 ntBASIC18.03■□□□□ 0.48
SLC28A2O43868 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SLC28A2O43868 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC28A2O43868 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.03■□□□□ 0.48
SLC28A2O43868 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.03■□□□□ 0.48
SLC28A2O43868 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SLC28A2O43868 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SLC28A2O43868 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC28A2O43868 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC28A2O43868 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.03■□□□□ 0.48
SLC28A2O43868 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.02■□□□□ 0.48
SLC28A2O43868 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC28A2O43868 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.02■□□□□ 0.48
SLC28A2O43868 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
SLC28A2O43868 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
SLC28A2O43868 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC28A2O43868 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.02■□□□□ 0.48
SLC28A2O43868 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SLC28A2O43868 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.02■□□□□ 0.48
SLC28A2O43868 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SLC28A2O43868 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.02■□□□□ 0.48
SLC28A2O43868 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.02■□□□□ 0.48
SLC28A2O43868 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.02■□□□□ 0.48
SLC28A2O43868 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
SLC28A2O43868 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.02■□□□□ 0.48
SLC28A2O43868 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.02■□□□□ 0.48
SLC28A2O43868 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
SLC28A2O43868 AL138966.2-201ENST00000621997 464 ntBASIC18.02■□□□□ 0.48
SLC28A2O43868 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC28A2O43868 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.02■□□□□ 0.47
SLC28A2O43868 BCL2-203ENST00000589955 5011 ntBASIC18.02■□□□□ 0.47
SLC28A2O43868 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC28A2O43868 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC28A2O43868 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC28A2O43868 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC28A2O43868 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SLC28A2O43868 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
SLC28A2O43868 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC28A2O43868 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC28A2O43868 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC28A2O43868 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC28A2O43868 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.02■□□□□ 0.47
SLC28A2O43868 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A2O43868 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
SLC28A2O43868 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A2O43868 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SLC28A2O43868 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A2O43868 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A2O43868 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A2O43868 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
SLC28A2O43868 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SLC28A2O43868 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A2O43868 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A2O43868 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC28A2O43868 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A2O43868 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SLC28A2O43868 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A2O43868 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A2O43868 MESTP1-201ENST00000404287 994 ntBASIC18.01■□□□□ 0.47
SLC28A2O43868 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC28A2O43868 AP000347.1-202ENST00000435868 847 ntBASIC18.01■□□□□ 0.47
SLC28A2O43868 AL671277.2-201ENST00000458060 996 ntBASIC18.01■□□□□ 0.47
SLC28A2O43868 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.01■□□□□ 0.47
SLC28A2O43868 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC28A2O43868 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.01■□□□□ 0.47
SLC28A2O43868 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
SLC28A2O43868 AC026271.3-201ENST00000571884 352 ntBASIC18.01■□□□□ 0.47
SLC28A2O43868 AC023511.2-201ENST00000618803 211 ntBASIC18.01■□□□□ 0.47
SLC28A2O43868 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC28A2O43868 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A2O43868 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A2O43868 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A2O43868 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A2O43868 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC28A2O43868 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A2O43868 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A2O43868 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A2O43868 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.01■□□□□ 0.47
SLC28A2O43868 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SLC28A2O43868 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A2O43868 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A2O43868 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC28A2O43868 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SLC28A2O43868 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC28A2O43868 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC28A2O43868 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18■□□□□ 0.47
SLC28A2O43868 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SLC28A2O43868 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC28A2O43868 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms