Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SSNA1O43805 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SSNA1O43805 RBM17P2-201ENST00000616397 1405 ntBASIC15.97■□□□□ 0.15
SSNA1O43805 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
SSNA1O43805 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SSNA1O43805 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.97■□□□□ 0.15
SSNA1O43805 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SSNA1O43805 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SSNA1O43805 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC15.97■□□□□ 0.15
SSNA1O43805 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SSNA1O43805 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SSNA1O43805 MIR4767-201ENST00000582827 78 ntBASIC15.97■□□□□ 0.15
SSNA1O43805 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.97■□□□□ 0.15
SSNA1O43805 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SSNA1O43805 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SSNA1O43805 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SSNA1O43805 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SSNA1O43805 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SSNA1O43805 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
SSNA1O43805 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.97■□□□□ 0.15
SSNA1O43805 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SSNA1O43805 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SSNA1O43805 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SSNA1O43805 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SSNA1O43805 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
SSNA1O43805 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
SSNA1O43805 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SSNA1O43805 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SSNA1O43805 MPST-204ENST00000404393 1329 ntTSL 5 BASIC15.96■□□□□ 0.15
SSNA1O43805 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SSNA1O43805 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SSNA1O43805 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SSNA1O43805 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SSNA1O43805 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC15.96■□□□□ 0.15
SSNA1O43805 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SSNA1O43805 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.96■□□□□ 0.15
SSNA1O43805 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SSNA1O43805 SLC25A6P5-201ENST00000435663 894 ntBASIC15.96■□□□□ 0.15
SSNA1O43805 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SSNA1O43805 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.96■□□□□ 0.15
SSNA1O43805 CD44-222ENST00000526025 1052 ntTSL 2 BASIC15.96■□□□□ 0.15
SSNA1O43805 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SSNA1O43805 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SSNA1O43805 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SSNA1O43805 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SSNA1O43805 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.96■□□□□ 0.15
SSNA1O43805 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SSNA1O43805 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SSNA1O43805 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.96■□□□□ 0.15
SSNA1O43805 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SSNA1O43805 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
SSNA1O43805 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.95■□□□□ 0.14
SSNA1O43805 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSNA1O43805 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSNA1O43805 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC15.95■□□□□ 0.14
SSNA1O43805 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SSNA1O43805 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSNA1O43805 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.95■□□□□ 0.14
SSNA1O43805 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSNA1O43805 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SSNA1O43805 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSNA1O43805 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSNA1O43805 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSNA1O43805 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSNA1O43805 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSNA1O43805 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSNA1O43805 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SSNA1O43805 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.95■□□□□ 0.14
SSNA1O43805 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSNA1O43805 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC15.95■□□□□ 0.14
SSNA1O43805 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSNA1O43805 DUX4L2-201ENST00000561772 1275 ntBASIC15.95■□□□□ 0.14
SSNA1O43805 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC15.95■□□□□ 0.14
SSNA1O43805 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC15.95■□□□□ 0.14
SSNA1O43805 DUX4L6-201ENST00000626483 1275 ntBASIC15.95■□□□□ 0.14
SSNA1O43805 DUX4L1-201ENST00000627662 1275 ntBASIC15.95■□□□□ 0.14
SSNA1O43805 DUX4L8-201ENST00000629013 1275 ntBASIC15.95■□□□□ 0.14
SSNA1O43805 DUX4L3-201ENST00000630187 1275 ntBASIC15.95■□□□□ 0.14
SSNA1O43805 DUX4L7-201ENST00000630678 1275 ntBASIC15.95■□□□□ 0.14
SSNA1O43805 DUX4L5-201ENST00000630834 1275 ntBASIC15.95■□□□□ 0.14
SSNA1O43805 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSNA1O43805 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SSNA1O43805 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SSNA1O43805 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSNA1O43805 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSNA1O43805 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSNA1O43805 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
SSNA1O43805 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SSNA1O43805 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SSNA1O43805 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
SSNA1O43805 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSNA1O43805 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSNA1O43805 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSNA1O43805 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
SSNA1O43805 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
SSNA1O43805 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC15.95■□□□□ 0.14
SSNA1O43805 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSNA1O43805 AC018695.7-201ENST00000624587 2492 ntBASIC15.94■□□□□ 0.14
SSNA1O43805 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSNA1O43805 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms