Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC189A1A4V9 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC189A1A4V9 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC189A1A4V9 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC189A1A4V9 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC189A1A4V9 KRT16P5-201ENST00000455284 522 ntBASIC18.73■□□□□ 0.59
CCDC189A1A4V9 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.73■□□□□ 0.59
CCDC189A1A4V9 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.73■□□□□ 0.59
CCDC189A1A4V9 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC189A1A4V9 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC189A1A4V9 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC189A1A4V9 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC189A1A4V9 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC189A1A4V9 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC189A1A4V9 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC189A1A4V9 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC189A1A4V9 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC189A1A4V9 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC189A1A4V9 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC189A1A4V9 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC189A1A4V9 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC189A1A4V9 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC189A1A4V9 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC189A1A4V9 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC189A1A4V9 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC189A1A4V9 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC189A1A4V9 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC189A1A4V9 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC189A1A4V9 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CCDC189A1A4V9 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC189A1A4V9 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC189A1A4V9 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC189A1A4V9 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC189A1A4V9 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC189A1A4V9 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC189A1A4V9 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC189A1A4V9 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC189A1A4V9 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.72■□□□□ 0.59
CCDC189A1A4V9 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC189A1A4V9 HLA-L-209ENST00000420110 1011 ntBASIC18.72■□□□□ 0.59
CCDC189A1A4V9 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC189A1A4V9 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC189A1A4V9 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC189A1A4V9 AC133681.1-201ENST00000465482 601 ntBASIC18.72■□□□□ 0.59
CCDC189A1A4V9 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.72■□□□□ 0.59
CCDC189A1A4V9 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC189A1A4V9 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC189A1A4V9 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC189A1A4V9 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.72■□□□□ 0.59
CCDC189A1A4V9 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC189A1A4V9 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.72■□□□□ 0.59
CCDC189A1A4V9 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC189A1A4V9 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CCDC189A1A4V9 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC189A1A4V9 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
CCDC189A1A4V9 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC189A1A4V9 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CCDC189A1A4V9 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC189A1A4V9 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC189A1A4V9 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC189A1A4V9 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC189A1A4V9 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC189A1A4V9 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.71■□□□□ 0.59
CCDC189A1A4V9 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC189A1A4V9 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC189A1A4V9 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC189A1A4V9 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC189A1A4V9 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC189A1A4V9 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
CCDC189A1A4V9 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC189A1A4V9 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC189A1A4V9 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC189A1A4V9 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
CCDC189A1A4V9 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC189A1A4V9 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC189A1A4V9 ID1-201ENST00000376105 1233 ntBASIC18.71■□□□□ 0.59
CCDC189A1A4V9 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CCDC189A1A4V9 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.71■□□□□ 0.59
CCDC189A1A4V9 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.71■□□□□ 0.59
CCDC189A1A4V9 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC189A1A4V9 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC189A1A4V9 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC189A1A4V9 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC189A1A4V9 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC189A1A4V9 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC189A1A4V9 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC189A1A4V9 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CCDC189A1A4V9 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CCDC189A1A4V9 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC189A1A4V9 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC189A1A4V9 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
CCDC189A1A4V9 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC189A1A4V9 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CCDC189A1A4V9 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CCDC189A1A4V9 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.71■□□□□ 0.58
CCDC189A1A4V9 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC189A1A4V9 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC189A1A4V9 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC189A1A4V9 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC189A1A4V9 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms