Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 BCL2-203ENST00000589955 5011 ntBASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 AC093525.10-201ENST00000625130 1569 ntBASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 Z98044.1-201ENST00000632503 1764 ntBASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 KRT18P57-201ENST00000443599 1254 ntBASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 SLC25A3P1-201ENST00000443844 931 ntBASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 EGLN1P1-201ENST00000531623 762 ntBASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 AL160286.2-201ENST00000567150 934 ntBASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 AL031598.1-201ENST00000561511 1773 ntBASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 IRX1P1-201ENST00000438849 1838 ntBASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
TCRBV4S1A1TA0A5B7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
TCRBV4S1A1TA0A5B7 SDHAP1-207ENST00000440850 2000 ntBASIC15.05■□□□□ 0
TCRBV4S1A1TA0A5B7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC15.05■□□□□ 0
TCRBV4S1A1TA0A5B7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC15.05■□□□□ 0
TCRBV4S1A1TA0A5B7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TCRBV4S1A1TA0A5B7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
TCRBV4S1A1TA0A5B7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.05■□□□□ 0
TCRBV4S1A1TA0A5B7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TCRBV4S1A1TA0A5B7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
TCRBV4S1A1TA0A5B7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.05■□□□□ 0
TCRBV4S1A1TA0A5B7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TCRBV4S1A1TA0A5B7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TCRBV4S1A1TA0A5B7 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
TCRBV4S1A1TA0A5B7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC15.05■□□□□ -0
TCRBV4S1A1TA0A5B7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.05■□□□□ -0
TCRBV4S1A1TA0A5B7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.05■□□□□ -0
TCRBV4S1A1TA0A5B7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.05■□□□□ -0
TCRBV4S1A1TA0A5B7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
TCRBV4S1A1TA0A5B7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.05■□□□□ -0
TCRBV4S1A1TA0A5B7 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC15.05■□□□□ -0
TCRBV4S1A1TA0A5B7 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TCRBV4S1A1TA0A5B7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC15.05■□□□□ -0
TCRBV4S1A1TA0A5B7 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TCRBV4S1A1TA0A5B7 FP475955.4-201ENST00000623131 1990 ntBASIC15.05■□□□□ -0
TCRBV4S1A1TA0A5B7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.05■□□□□ -0
TCRBV4S1A1TA0A5B7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TCRBV4S1A1TA0A5B7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TCRBV4S1A1TA0A5B7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TCRBV4S1A1TA0A5B7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC15.05■□□□□ -0
TCRBV4S1A1TA0A5B7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TCRBV4S1A1TA0A5B7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TCRBV4S1A1TA0A5B7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TCRBV4S1A1TA0A5B7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TCRBV4S1A1TA0A5B7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC15.04■□□□□ -0
TCRBV4S1A1TA0A5B7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TCRBV4S1A1TA0A5B7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC15.04■□□□□ -0
TCRBV4S1A1TA0A5B7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TCRBV4S1A1TA0A5B7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC15.04■□□□□ -0
TCRBV4S1A1TA0A5B7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.04■□□□□ -0
TCRBV4S1A1TA0A5B7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.04■□□□□ -0
TCRBV4S1A1TA0A5B7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TCRBV4S1A1TA0A5B7 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.04■□□□□ -0
TCRBV4S1A1TA0A5B7 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms