Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SNX9Q9Y5X1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SNX9Q9Y5X1 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SNX9Q9Y5X1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.06■□□□□ 0.8
SNX9Q9Y5X1 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.06■□□□□ 0.8
SNX9Q9Y5X1 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.06■□□□□ 0.8
SNX9Q9Y5X1 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SNX9Q9Y5X1 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SNX9Q9Y5X1 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNX9Q9Y5X1 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.06■□□□□ 0.8
SNX9Q9Y5X1 RNF152P1-201ENST00000397754 604 ntBASIC20.06■□□□□ 0.8
SNX9Q9Y5X1 AP000523.1-201ENST00000398242 1049 ntBASIC20.06■□□□□ 0.8
SNX9Q9Y5X1 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.06■□□□□ 0.8
SNX9Q9Y5X1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SNX9Q9Y5X1 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.06■□□□□ 0.8
SNX9Q9Y5X1 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.06■□□□□ 0.8
SNX9Q9Y5X1 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SNX9Q9Y5X1 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.06■□□□□ 0.8
SNX9Q9Y5X1 AL441883.1-201ENST00000566170 1045 ntBASIC20.06■□□□□ 0.8
SNX9Q9Y5X1 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SNX9Q9Y5X1 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.06■□□□□ 0.8
SNX9Q9Y5X1 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.06■□□□□ 0.8
SNX9Q9Y5X1 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNX9Q9Y5X1 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNX9Q9Y5X1 HEIH-201ENST00000623091 1652 ntBASIC20.06■□□□□ 0.8
SNX9Q9Y5X1 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SNX9Q9Y5X1 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNX9Q9Y5X1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
SNX9Q9Y5X1 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNX9Q9Y5X1 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SNX9Q9Y5X1 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.06■□□□□ 0.8
SNX9Q9Y5X1 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.05■□□□□ 0.8
SNX9Q9Y5X1 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNX9Q9Y5X1 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNX9Q9Y5X1 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNX9Q9Y5X1 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SNX9Q9Y5X1 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.05■□□□□ 0.8
SNX9Q9Y5X1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SNX9Q9Y5X1 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.05■□□□□ 0.8
SNX9Q9Y5X1 TSPY5P-201ENST00000426936 936 ntBASIC20.05■□□□□ 0.8
SNX9Q9Y5X1 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SNX9Q9Y5X1 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.05■□□□□ 0.8
SNX9Q9Y5X1 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SNX9Q9Y5X1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNX9Q9Y5X1 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNX9Q9Y5X1 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNX9Q9Y5X1 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SNX9Q9Y5X1 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNX9Q9Y5X1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.05■□□□□ 0.8
SNX9Q9Y5X1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNX9Q9Y5X1 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.05■□□□□ 0.8
SNX9Q9Y5X1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNX9Q9Y5X1 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNX9Q9Y5X1 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNX9Q9Y5X1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNX9Q9Y5X1 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.04■□□□□ 0.8
SNX9Q9Y5X1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.04■□□□□ 0.8
SNX9Q9Y5X1 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNX9Q9Y5X1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNX9Q9Y5X1 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.04■□□□□ 0.8
SNX9Q9Y5X1 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNX9Q9Y5X1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SNX9Q9Y5X1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SNX9Q9Y5X1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNX9Q9Y5X1 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SNX9Q9Y5X1 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNX9Q9Y5X1 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.04■□□□□ 0.8
SNX9Q9Y5X1 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SNX9Q9Y5X1 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.04■□□□□ 0.8
SNX9Q9Y5X1 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.04■□□□□ 0.8
SNX9Q9Y5X1 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SNX9Q9Y5X1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.04■□□□□ 0.8
SNX9Q9Y5X1 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNX9Q9Y5X1 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNX9Q9Y5X1 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SNX9Q9Y5X1 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNX9Q9Y5X1 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNX9Q9Y5X1 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SNX9Q9Y5X1 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SNX9Q9Y5X1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SNX9Q9Y5X1 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SNX9Q9Y5X1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SNX9Q9Y5X1 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SNX9Q9Y5X1 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNX9Q9Y5X1 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SNX9Q9Y5X1 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.03■□□□□ 0.8
SNX9Q9Y5X1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SNX9Q9Y5X1 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SNX9Q9Y5X1 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNX9Q9Y5X1 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNX9Q9Y5X1 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SNX9Q9Y5X1 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SNX9Q9Y5X1 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.03■□□□□ 0.8
SNX9Q9Y5X1 AC063952.2-201ENST00000498792 1227 ntBASIC20.03■□□□□ 0.8
SNX9Q9Y5X1 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.03■□□□□ 0.8
SNX9Q9Y5X1 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.03■□□□□ 0.8
SNX9Q9Y5X1 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.03■□□□□ 0.8
SNX9Q9Y5X1 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SNX9Q9Y5X1 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SNX9Q9Y5X1 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms