Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
AP4S1Q9Y587 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP4S1Q9Y587 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP4S1Q9Y587 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP4S1Q9Y587 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
AP4S1Q9Y587 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP4S1Q9Y587 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.72■□□□□ 0.43
AP4S1Q9Y587 AC069236.1-201ENST00000604339 616 ntBASIC17.72■□□□□ 0.43
AP4S1Q9Y587 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP4S1Q9Y587 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP4S1Q9Y587 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
AP4S1Q9Y587 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP4S1Q9Y587 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP4S1Q9Y587 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
AP4S1Q9Y587 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
AP4S1Q9Y587 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP4S1Q9Y587 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP4S1Q9Y587 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.71■□□□□ 0.43
AP4S1Q9Y587 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP4S1Q9Y587 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
AP4S1Q9Y587 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP4S1Q9Y587 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
AP4S1Q9Y587 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP4S1Q9Y587 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP4S1Q9Y587 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP4S1Q9Y587 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP4S1Q9Y587 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
AP4S1Q9Y587 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP4S1Q9Y587 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
AP4S1Q9Y587 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP4S1Q9Y587 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP4S1Q9Y587 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP4S1Q9Y587 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.71■□□□□ 0.43
AP4S1Q9Y587 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP4S1Q9Y587 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP4S1Q9Y587 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP4S1Q9Y587 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP4S1Q9Y587 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP4S1Q9Y587 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
AP4S1Q9Y587 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP4S1Q9Y587 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
AP4S1Q9Y587 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
AP4S1Q9Y587 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
AP4S1Q9Y587 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP4S1Q9Y587 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP4S1Q9Y587 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP4S1Q9Y587 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
AP4S1Q9Y587 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.71■□□□□ 0.42
AP4S1Q9Y587 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.71■□□□□ 0.42
AP4S1Q9Y587 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP4S1Q9Y587 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP4S1Q9Y587 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP4S1Q9Y587 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AP4S1Q9Y587 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP4S1Q9Y587 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.7■□□□□ 0.42
AP4S1Q9Y587 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP4S1Q9Y587 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP4S1Q9Y587 CNN2P6-201ENST00000439038 900 ntBASIC17.7■□□□□ 0.42
AP4S1Q9Y587 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.7■□□□□ 0.42
AP4S1Q9Y587 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AP4S1Q9Y587 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AP4S1Q9Y587 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
AP4S1Q9Y587 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.7■□□□□ 0.42
AP4S1Q9Y587 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.7■□□□□ 0.42
AP4S1Q9Y587 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP4S1Q9Y587 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.7■□□□□ 0.42
AP4S1Q9Y587 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
AP4S1Q9Y587 AL499627.1-201ENST00000569373 2188 ntBASIC17.7■□□□□ 0.42
AP4S1Q9Y587 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.7■□□□□ 0.42
AP4S1Q9Y587 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP4S1Q9Y587 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
AP4S1Q9Y587 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
AP4S1Q9Y587 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4S1Q9Y587 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4S1Q9Y587 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4S1Q9Y587 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4S1Q9Y587 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4S1Q9Y587 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
AP4S1Q9Y587 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
AP4S1Q9Y587 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4S1Q9Y587 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4S1Q9Y587 KRT17P1-201ENST00000399211 1546 ntBASIC17.69■□□□□ 0.42
AP4S1Q9Y587 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
AP4S1Q9Y587 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.69■□□□□ 0.42
AP4S1Q9Y587 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.69■□□□□ 0.42
AP4S1Q9Y587 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
AP4S1Q9Y587 GPX1P1-201ENST00000388829 606 ntBASIC17.69■□□□□ 0.42
AP4S1Q9Y587 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4S1Q9Y587 KRT18P11-201ENST00000435214 1283 ntBASIC17.69■□□□□ 0.42
AP4S1Q9Y587 YBX1P10-201ENST00000444752 975 ntBASIC17.69■□□□□ 0.42
AP4S1Q9Y587 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.69■□□□□ 0.42
AP4S1Q9Y587 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
AP4S1Q9Y587 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.69■□□□□ 0.42
AP4S1Q9Y587 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4S1Q9Y587 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
AP4S1Q9Y587 AC008694.1-202ENST00000636953 945 ntBASIC17.69■□□□□ 0.42
AP4S1Q9Y587 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4S1Q9Y587 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
AP4S1Q9Y587 AC010980.2-201ENST00000587099 1412 ntBASIC17.69■□□□□ 0.42
AP4S1Q9Y587 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms