Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 AC090340.1-201ENST00000620778 4980 ntBASIC19.11■□□□□ 0.65
CHMP2BQ9UQN3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP2BQ9UQN3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP2BQ9UQN3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP2BQ9UQN3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP2BQ9UQN3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.1■□□□□ 0.65
CHMP2BQ9UQN3 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.1■□□□□ 0.65
CHMP2BQ9UQN3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP2BQ9UQN3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP2BQ9UQN3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.1■□□□□ 0.65
CHMP2BQ9UQN3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP2BQ9UQN3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CHMP2BQ9UQN3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP2BQ9UQN3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP2BQ9UQN3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP2BQ9UQN3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CHMP2BQ9UQN3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP2BQ9UQN3 AC239809.2-201ENST00000415381 517 ntBASIC19.1■□□□□ 0.65
CHMP2BQ9UQN3 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP2BQ9UQN3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.1■□□□□ 0.65
CHMP2BQ9UQN3 AC026366.1-201ENST00000488803 879 ntBASIC19.1■□□□□ 0.65
CHMP2BQ9UQN3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.1■□□□□ 0.65
CHMP2BQ9UQN3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP2BQ9UQN3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP2BQ9UQN3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP2BQ9UQN3 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.1■□□□□ 0.65
CHMP2BQ9UQN3 MTMR9LP-203ENST00000426597 1545 ntBASIC19.1■□□□□ 0.65
CHMP2BQ9UQN3 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.1■□□□□ 0.65
CHMP2BQ9UQN3 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP2BQ9UQN3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP2BQ9UQN3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP2BQ9UQN3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP2BQ9UQN3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP2BQ9UQN3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP2BQ9UQN3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP2BQ9UQN3 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP2BQ9UQN3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP2BQ9UQN3 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CHMP2BQ9UQN3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.09■□□□□ 0.65
CHMP2BQ9UQN3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP2BQ9UQN3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP2BQ9UQN3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.09■□□□□ 0.65
CHMP2BQ9UQN3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP2BQ9UQN3 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.09■□□□□ 0.65
CHMP2BQ9UQN3 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.09■□□□□ 0.65
CHMP2BQ9UQN3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.09■□□□□ 0.65
CHMP2BQ9UQN3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP2BQ9UQN3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP2BQ9UQN3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP2BQ9UQN3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP2BQ9UQN3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP2BQ9UQN3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CHMP2BQ9UQN3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.08■□□□□ 0.65
CHMP2BQ9UQN3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
CHMP2BQ9UQN3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CHMP2BQ9UQN3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CHMP2BQ9UQN3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.08■□□□□ 0.65
CHMP2BQ9UQN3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.08■□□□□ 0.65
CHMP2BQ9UQN3 ABALON-201ENST00000629058 1903 ntBASIC19.08■□□□□ 0.65
CHMP2BQ9UQN3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.08■□□□□ 0.65
CHMP2BQ9UQN3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CHMP2BQ9UQN3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
CHMP2BQ9UQN3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.65
CHMP2BQ9UQN3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP2BQ9UQN3 POU5F1P3-201ENST00000428824 1078 ntBASIC19.08■□□□□ 0.64
CHMP2BQ9UQN3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP2BQ9UQN3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.08■□□□□ 0.64
CHMP2BQ9UQN3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.08■□□□□ 0.64
CHMP2BQ9UQN3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
CHMP2BQ9UQN3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.08■□□□□ 0.64
CHMP2BQ9UQN3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CHMP2BQ9UQN3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP2BQ9UQN3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP2BQ9UQN3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP2BQ9UQN3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP2BQ9UQN3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP2BQ9UQN3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CHMP2BQ9UQN3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CHMP2BQ9UQN3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP2BQ9UQN3 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP2BQ9UQN3 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CHMP2BQ9UQN3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP2BQ9UQN3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP2BQ9UQN3 KRT8P11-201ENST00000409686 1436 ntBASIC19.08■□□□□ 0.64
CHMP2BQ9UQN3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CHMP2BQ9UQN3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.08■□□□□ 0.64
CHMP2BQ9UQN3 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.08■□□□□ 0.64
CHMP2BQ9UQN3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP2BQ9UQN3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP2BQ9UQN3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP2BQ9UQN3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP2BQ9UQN3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP2BQ9UQN3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CHMP2BQ9UQN3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
CHMP2BQ9UQN3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP2BQ9UQN3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP2BQ9UQN3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP2BQ9UQN3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP2BQ9UQN3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CHMP2BQ9UQN3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms