Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC24.49■■□□□ 1.51
SPG7Q9UQ90 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC24.49■■□□□ 1.51
SPG7Q9UQ90 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC24.49■■□□□ 1.51
SPG7Q9UQ90 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC24.49■■□□□ 1.51
SPG7Q9UQ90 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
SPG7Q9UQ90 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SPG7Q9UQ90 AC006333.2-201ENST00000607957 2099 ntBASIC24.49■■□□□ 1.51
SPG7Q9UQ90 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SPG7Q9UQ90 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SPG7Q9UQ90 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
SPG7Q9UQ90 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SPG7Q9UQ90 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SPG7Q9UQ90 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SPG7Q9UQ90 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SPG7Q9UQ90 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SPG7Q9UQ90 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC24.48■■□□□ 1.51
SPG7Q9UQ90 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SPG7Q9UQ90 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC24.48■■□□□ 1.51
SPG7Q9UQ90 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC24.48■■□□□ 1.51
SPG7Q9UQ90 PBK-203ENST00000522944 1499 ntTSL 2 BASIC24.48■■□□□ 1.51
SPG7Q9UQ90 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC24.48■■□□□ 1.51
SPG7Q9UQ90 AL390719.2-201ENST00000606993 987 ntBASIC24.48■■□□□ 1.51
SPG7Q9UQ90 AL732292.2-201ENST00000609649 430 ntBASIC24.48■■□□□ 1.51
SPG7Q9UQ90 AL121772.3-201ENST00000610840 674 ntBASIC24.48■■□□□ 1.51
SPG7Q9UQ90 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC24.48■■□□□ 1.51
SPG7Q9UQ90 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
SPG7Q9UQ90 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
SPG7Q9UQ90 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC24.47■■□□□ 1.51
SPG7Q9UQ90 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SPG7Q9UQ90 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SPG7Q9UQ90 KRT8P10-201ENST00000450021 1447 ntBASIC24.47■■□□□ 1.51
SPG7Q9UQ90 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SPG7Q9UQ90 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SPG7Q9UQ90 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC24.47■■□□□ 1.51
SPG7Q9UQ90 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
SPG7Q9UQ90 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SPG7Q9UQ90 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC24.47■■□□□ 1.51
SPG7Q9UQ90 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC24.47■■□□□ 1.51
SPG7Q9UQ90 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC24.47■■□□□ 1.51
SPG7Q9UQ90 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
SPG7Q9UQ90 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
SPG7Q9UQ90 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC24.47■■□□□ 1.51
SPG7Q9UQ90 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC24.46■■□□□ 1.51
SPG7Q9UQ90 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SPG7Q9UQ90 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SPG7Q9UQ90 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC24.46■■□□□ 1.51
SPG7Q9UQ90 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC24.46■■□□□ 1.51
SPG7Q9UQ90 AC091304.2-201ENST00000564639 760 ntBASIC24.46■■□□□ 1.51
SPG7Q9UQ90 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
SPG7Q9UQ90 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
SPG7Q9UQ90 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SPG7Q9UQ90 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
SPG7Q9UQ90 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC24.45■■□□□ 1.51
SPG7Q9UQ90 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
SPG7Q9UQ90 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.51
SPG7Q9UQ90 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC24.45■■□□□ 1.5
SPG7Q9UQ90 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SPG7Q9UQ90 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SPG7Q9UQ90 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SPG7Q9UQ90 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC24.45■■□□□ 1.5
SPG7Q9UQ90 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SPG7Q9UQ90 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC24.45■■□□□ 1.5
SPG7Q9UQ90 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC24.45■■□□□ 1.5
SPG7Q9UQ90 EMBP1-201ENST00000458200 901 ntBASIC24.45■■□□□ 1.5
SPG7Q9UQ90 FOSL1P1-201ENST00000511041 816 ntBASIC24.45■■□□□ 1.5
SPG7Q9UQ90 IGHV3-41-201ENST00000613121 348 ntBASIC24.45■■□□□ 1.5
SPG7Q9UQ90 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC24.45■■□□□ 1.5
SPG7Q9UQ90 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SPG7Q9UQ90 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SPG7Q9UQ90 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SPG7Q9UQ90 FP475955.4-201ENST00000623131 1990 ntBASIC24.45■■□□□ 1.5
SPG7Q9UQ90 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SPG7Q9UQ90 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC24.45■■□□□ 1.5
SPG7Q9UQ90 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC24.45■■□□□ 1.5
SPG7Q9UQ90 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
SPG7Q9UQ90 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
SPG7Q9UQ90 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC24.44■■□□□ 1.5
SPG7Q9UQ90 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC24.44■■□□□ 1.5
SPG7Q9UQ90 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SPG7Q9UQ90 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
SPG7Q9UQ90 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC24.44■■□□□ 1.5
SPG7Q9UQ90 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SPG7Q9UQ90 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SPG7Q9UQ90 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SPG7Q9UQ90 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC24.44■■□□□ 1.5
SPG7Q9UQ90 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
SPG7Q9UQ90 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC24.44■■□□□ 1.5
SPG7Q9UQ90 NAT14-202ENST00000587400 416 ntTSL 5 BASIC24.44■■□□□ 1.5
SPG7Q9UQ90 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC24.44■■□□□ 1.5
SPG7Q9UQ90 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SPG7Q9UQ90 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SPG7Q9UQ90 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
SPG7Q9UQ90 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SPG7Q9UQ90 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
SPG7Q9UQ90 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC24.44■■□□□ 1.5
SPG7Q9UQ90 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SPG7Q9UQ90 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SPG7Q9UQ90 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SPG7Q9UQ90 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SPG7Q9UQ90 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms