Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX41Q9UJV9 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.55■■□□□ 1.04
DDX41Q9UJV9 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX41Q9UJV9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX41Q9UJV9 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX41Q9UJV9 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX41Q9UJV9 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX41Q9UJV9 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
DDX41Q9UJV9 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.54■■□□□ 1.04
DDX41Q9UJV9 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX41Q9UJV9 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
DDX41Q9UJV9 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX41Q9UJV9 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.54■■□□□ 1.04
DDX41Q9UJV9 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
DDX41Q9UJV9 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.54■■□□□ 1.04
DDX41Q9UJV9 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
DDX41Q9UJV9 AL031432.5-201ENST00000641059 760 ntBASIC21.54■■□□□ 1.04
DDX41Q9UJV9 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX41Q9UJV9 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
DDX41Q9UJV9 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC21.54■■□□□ 1.04
DDX41Q9UJV9 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
DDX41Q9UJV9 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
DDX41Q9UJV9 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.54■■□□□ 1.04
DDX41Q9UJV9 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX41Q9UJV9 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
DDX41Q9UJV9 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX41Q9UJV9 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX41Q9UJV9 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
DDX41Q9UJV9 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.53■■□□□ 1.04
DDX41Q9UJV9 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX41Q9UJV9 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX41Q9UJV9 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
DDX41Q9UJV9 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX41Q9UJV9 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.53■■□□□ 1.04
DDX41Q9UJV9 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.53■■□□□ 1.04
DDX41Q9UJV9 AL031133.1-201ENST00000406807 723 ntBASIC21.53■■□□□ 1.04
DDX41Q9UJV9 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.53■■□□□ 1.04
DDX41Q9UJV9 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.53■■□□□ 1.04
DDX41Q9UJV9 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX41Q9UJV9 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX41Q9UJV9 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
DDX41Q9UJV9 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX41Q9UJV9 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.53■■□□□ 1.04
DDX41Q9UJV9 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.53■■□□□ 1.04
DDX41Q9UJV9 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX41Q9UJV9 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.52■■□□□ 1.04
DDX41Q9UJV9 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX41Q9UJV9 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX41Q9UJV9 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX41Q9UJV9 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX41Q9UJV9 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
DDX41Q9UJV9 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX41Q9UJV9 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.52■■□□□ 1.04
DDX41Q9UJV9 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.52■■□□□ 1.04
DDX41Q9UJV9 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX41Q9UJV9 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX41Q9UJV9 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX41Q9UJV9 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.52■■□□□ 1.04
DDX41Q9UJV9 SDHAP1-207ENST00000440850 2000 ntBASIC21.52■■□□□ 1.04
DDX41Q9UJV9 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX41Q9UJV9 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX41Q9UJV9 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX41Q9UJV9 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.52■■□□□ 1.04
DDX41Q9UJV9 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
DDX41Q9UJV9 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
DDX41Q9UJV9 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.52■■□□□ 1.04
DDX41Q9UJV9 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.52■■□□□ 1.04
DDX41Q9UJV9 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.52■■□□□ 1.04
DDX41Q9UJV9 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.52■■□□□ 1.04
DDX41Q9UJV9 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.52■■□□□ 1.04
DDX41Q9UJV9 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX41Q9UJV9 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.52■■□□□ 1.04
DDX41Q9UJV9 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
DDX41Q9UJV9 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX41Q9UJV9 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.52■■□□□ 1.04
DDX41Q9UJV9 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX41Q9UJV9 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.52■■□□□ 1.03
DDX41Q9UJV9 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
DDX41Q9UJV9 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
DDX41Q9UJV9 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.52■■□□□ 1.03
DDX41Q9UJV9 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
DDX41Q9UJV9 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX41Q9UJV9 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX41Q9UJV9 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.51■■□□□ 1.03
DDX41Q9UJV9 AL032819.2-201ENST00000624543 2162 ntBASIC21.51■■□□□ 1.03
DDX41Q9UJV9 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX41Q9UJV9 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DDX41Q9UJV9 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
DDX41Q9UJV9 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DDX41Q9UJV9 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
DDX41Q9UJV9 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.51■■□□□ 1.03
DDX41Q9UJV9 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX41Q9UJV9 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX41Q9UJV9 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.51■■□□□ 1.03
DDX41Q9UJV9 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.51■■□□□ 1.03
DDX41Q9UJV9 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX41Q9UJV9 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.51■■□□□ 1.03
DDX41Q9UJV9 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.51■■□□□ 1.03
DDX41Q9UJV9 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.51■■□□□ 1.03
DDX41Q9UJV9 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms