Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBQLN4Q9NRR5 TSPY14P-201ENST00000303979 915 ntBASIC17.24■□□□□ 0.35
UBQLN4Q9NRR5 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
UBQLN4Q9NRR5 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.24■□□□□ 0.35
UBQLN4Q9NRR5 AL023284.2-201ENST00000405850 579 ntBASIC17.24■□□□□ 0.35
UBQLN4Q9NRR5 MCCD1P1-208ENST00000445732 328 ntBASIC17.24■□□□□ 0.35
UBQLN4Q9NRR5 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.24■□□□□ 0.35
UBQLN4Q9NRR5 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.24■□□□□ 0.35
UBQLN4Q9NRR5 EGLN1P1-201ENST00000531623 762 ntBASIC17.24■□□□□ 0.35
UBQLN4Q9NRR5 BX088651.1-201ENST00000540551 451 ntBASIC17.24■□□□□ 0.35
UBQLN4Q9NRR5 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBQLN4Q9NRR5 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBQLN4Q9NRR5 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBQLN4Q9NRR5 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBQLN4Q9NRR5 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
UBQLN4Q9NRR5 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.24■□□□□ 0.35
UBQLN4Q9NRR5 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
UBQLN4Q9NRR5 HCG11-201ENST00000411553 5696 ntBASIC17.23■□□□□ 0.35
UBQLN4Q9NRR5 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
UBQLN4Q9NRR5 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBQLN4Q9NRR5 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBQLN4Q9NRR5 GPAT2P1-201ENST00000444924 1672 ntBASIC17.23■□□□□ 0.35
UBQLN4Q9NRR5 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBQLN4Q9NRR5 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBQLN4Q9NRR5 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBQLN4Q9NRR5 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBQLN4Q9NRR5 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.23■□□□□ 0.35
UBQLN4Q9NRR5 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBQLN4Q9NRR5 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.23■□□□□ 0.35
UBQLN4Q9NRR5 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBQLN4Q9NRR5 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.23■□□□□ 0.35
UBQLN4Q9NRR5 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBQLN4Q9NRR5 NAPSB-206ENST00000562112 1266 ntBASIC17.23■□□□□ 0.35
UBQLN4Q9NRR5 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.23■□□□□ 0.35
UBQLN4Q9NRR5 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
UBQLN4Q9NRR5 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBQLN4Q9NRR5 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBQLN4Q9NRR5 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBQLN4Q9NRR5 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.23■□□□□ 0.35
UBQLN4Q9NRR5 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBQLN4Q9NRR5 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.23■□□□□ 0.35
UBQLN4Q9NRR5 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
UBQLN4Q9NRR5 AC092338.2-201ENST00000568827 1415 ntBASIC17.22■□□□□ 0.35
UBQLN4Q9NRR5 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN4Q9NRR5 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN4Q9NRR5 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN4Q9NRR5 AL357033.4-201ENST00000617703 1807 ntBASIC17.22■□□□□ 0.35
UBQLN4Q9NRR5 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN4Q9NRR5 AC008556.1-201ENST00000610908 2040 ntBASIC17.22■□□□□ 0.35
UBQLN4Q9NRR5 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN4Q9NRR5 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.22■□□□□ 0.35
UBQLN4Q9NRR5 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN4Q9NRR5 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
UBQLN4Q9NRR5 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN4Q9NRR5 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN4Q9NRR5 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
UBQLN4Q9NRR5 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.22■□□□□ 0.35
UBQLN4Q9NRR5 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.22■□□□□ 0.35
UBQLN4Q9NRR5 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.22■□□□□ 0.35
UBQLN4Q9NRR5 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.22■□□□□ 0.35
UBQLN4Q9NRR5 AC128688.1-201ENST00000487626 519 ntBASIC17.22■□□□□ 0.35
UBQLN4Q9NRR5 AP003041.3-201ENST00000527151 707 ntBASIC17.22■□□□□ 0.35
UBQLN4Q9NRR5 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN4Q9NRR5 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN4Q9NRR5 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN4Q9NRR5 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.22■□□□□ 0.35
UBQLN4Q9NRR5 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN4Q9NRR5 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.22■□□□□ 0.35
UBQLN4Q9NRR5 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN4Q9NRR5 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN4Q9NRR5 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN4Q9NRR5 AC020763.4-201ENST00000623414 4170 ntBASIC17.21■□□□□ 0.35
UBQLN4Q9NRR5 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
UBQLN4Q9NRR5 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
UBQLN4Q9NRR5 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.21■□□□□ 0.35
UBQLN4Q9NRR5 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBQLN4Q9NRR5 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBQLN4Q9NRR5 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBQLN4Q9NRR5 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBQLN4Q9NRR5 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBQLN4Q9NRR5 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBQLN4Q9NRR5 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBQLN4Q9NRR5 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
UBQLN4Q9NRR5 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.21■□□□□ 0.35
UBQLN4Q9NRR5 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
UBQLN4Q9NRR5 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.21■□□□□ 0.35
UBQLN4Q9NRR5 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.21■□□□□ 0.35
UBQLN4Q9NRR5 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBQLN4Q9NRR5 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.21■□□□□ 0.35
UBQLN4Q9NRR5 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBQLN4Q9NRR5 AC010653.2-201ENST00000623505 997 ntBASIC17.21■□□□□ 0.35
UBQLN4Q9NRR5 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBQLN4Q9NRR5 AL020996.1-203ENST00000536896 2307 ntBASIC17.21■□□□□ 0.35
UBQLN4Q9NRR5 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBQLN4Q9NRR5 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBQLN4Q9NRR5 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBQLN4Q9NRR5 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBQLN4Q9NRR5 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.21■□□□□ 0.34
UBQLN4Q9NRR5 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.21■□□□□ 0.34
UBQLN4Q9NRR5 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms