Protein–RNA interactions for Protein: Q9NQ94

A1CF, APOBEC1 complementation factor, humanhuman

Known RBP Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A1CFQ9NQ94 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
A1CFQ9NQ94 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.36■■□□□ 1.01
A1CFQ9NQ94 HOXB1-202ENST00000577092 1414 ntBASIC21.36■■□□□ 1.01
A1CFQ9NQ94 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.36■■□□□ 1.01
A1CFQ9NQ94 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
A1CFQ9NQ94 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
A1CFQ9NQ94 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.36■■□□□ 1.01
A1CFQ9NQ94 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
A1CFQ9NQ94 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC21.35■■□□□ 1.01
A1CFQ9NQ94 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
A1CFQ9NQ94 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
A1CFQ9NQ94 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
A1CFQ9NQ94 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
A1CFQ9NQ94 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC21.35■■□□□ 1.01
A1CFQ9NQ94 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
A1CFQ9NQ94 MIR564-202ENST00000385049 94 ntBASIC21.35■■□□□ 1.01
A1CFQ9NQ94 AL450487.1-201ENST00000426799 995 ntBASIC21.35■■□□□ 1.01
A1CFQ9NQ94 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.35■■□□□ 1.01
A1CFQ9NQ94 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.35■■□□□ 1.01
A1CFQ9NQ94 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC21.35■■□□□ 1.01
A1CFQ9NQ94 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
A1CFQ9NQ94 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
A1CFQ9NQ94 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
A1CFQ9NQ94 FP475955.4-201ENST00000623131 1990 ntBASIC21.35■■□□□ 1.01
A1CFQ9NQ94 KRT8P7-201ENST00000533003 1432 ntBASIC21.35■■□□□ 1.01
A1CFQ9NQ94 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
A1CFQ9NQ94 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
A1CFQ9NQ94 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
A1CFQ9NQ94 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
A1CFQ9NQ94 AC016734.2-201ENST00000624325 1377 ntBASIC21.35■■□□□ 1.01
A1CFQ9NQ94 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.35■■□□□ 1.01
A1CFQ9NQ94 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
A1CFQ9NQ94 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.34■■□□□ 1.01
A1CFQ9NQ94 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
A1CFQ9NQ94 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
A1CFQ9NQ94 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
A1CFQ9NQ94 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
A1CFQ9NQ94 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
A1CFQ9NQ94 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
A1CFQ9NQ94 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
A1CFQ9NQ94 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
A1CFQ9NQ94 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
A1CFQ9NQ94 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
A1CFQ9NQ94 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.34■■□□□ 1.01
A1CFQ9NQ94 AC104390.1-201ENST00000555663 520 ntBASIC21.34■■□□□ 1.01
A1CFQ9NQ94 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC21.34■■□□□ 1.01
A1CFQ9NQ94 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
A1CFQ9NQ94 AC010240.3-201ENST00000607688 395 ntBASIC21.34■■□□□ 1.01
A1CFQ9NQ94 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21.34■■□□□ 1.01
A1CFQ9NQ94 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
A1CFQ9NQ94 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
A1CFQ9NQ94 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
A1CFQ9NQ94 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.34■■□□□ 1.01
A1CFQ9NQ94 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
A1CFQ9NQ94 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
A1CFQ9NQ94 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
A1CFQ9NQ94 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.34■■□□□ 1.01
A1CFQ9NQ94 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
A1CFQ9NQ94 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
A1CFQ9NQ94 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
A1CFQ9NQ94 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.33■■□□□ 1.01
A1CFQ9NQ94 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
A1CFQ9NQ94 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
A1CFQ9NQ94 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.33■■□□□ 1.01
A1CFQ9NQ94 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
A1CFQ9NQ94 AFG3L1P-217ENST00000557444 2447 ntBASIC21.33■■□□□ 1.01
A1CFQ9NQ94 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
A1CFQ9NQ94 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
A1CFQ9NQ94 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
A1CFQ9NQ94 MIR662-201ENST00000384847 95 ntBASIC21.33■■□□□ 1.01
A1CFQ9NQ94 TSSC2-201ENST00000450217 709 ntBASIC21.33■■□□□ 1.01
A1CFQ9NQ94 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC21.33■■□□□ 1.01
A1CFQ9NQ94 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.33■■□□□ 1.01
A1CFQ9NQ94 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
A1CFQ9NQ94 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.33■■□□□ 1.01
A1CFQ9NQ94 AL121672.3-201ENST00000608644 468 ntBASIC21.33■■□□□ 1.01
A1CFQ9NQ94 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.33■■□□□ 1.01
A1CFQ9NQ94 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
A1CFQ9NQ94 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
A1CFQ9NQ94 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
A1CFQ9NQ94 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.33■■□□□ 1
A1CFQ9NQ94 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.33■■□□□ 1
A1CFQ9NQ94 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
A1CFQ9NQ94 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
A1CFQ9NQ94 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.32■■□□□ 1
A1CFQ9NQ94 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
A1CFQ9NQ94 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
A1CFQ9NQ94 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.32■■□□□ 1
A1CFQ9NQ94 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
A1CFQ9NQ94 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
A1CFQ9NQ94 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
A1CFQ9NQ94 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21.32■■□□□ 1
A1CFQ9NQ94 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.32■■□□□ 1
A1CFQ9NQ94 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.32■■□□□ 1
A1CFQ9NQ94 AP002383.4-201ENST00000442518 975 ntBASIC21.32■■□□□ 1
A1CFQ9NQ94 BX276092.5-203ENST00000456199 560 ntBASIC21.32■■□□□ 1
A1CFQ9NQ94 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
A1CFQ9NQ94 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
A1CFQ9NQ94 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
A1CFQ9NQ94 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms