Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 AL023284.2-201ENST00000405850 579 ntBASIC19.2■□□□□ 0.66
SP110Q9HB58 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SP110Q9HB58 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.2■□□□□ 0.66
SP110Q9HB58 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.2■□□□□ 0.66
SP110Q9HB58 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.2■□□□□ 0.66
SP110Q9HB58 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SP110Q9HB58 AC010653.2-201ENST00000623505 997 ntBASIC19.2■□□□□ 0.66
SP110Q9HB58 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.2■□□□□ 0.66
SP110Q9HB58 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SP110Q9HB58 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.2■□□□□ 0.66
SP110Q9HB58 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SP110Q9HB58 KRT18P22-201ENST00000402024 1347 ntBASIC19.2■□□□□ 0.66
SP110Q9HB58 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SP110Q9HB58 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SP110Q9HB58 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.19■□□□□ 0.66
SP110Q9HB58 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SP110Q9HB58 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.19■□□□□ 0.66
SP110Q9HB58 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SP110Q9HB58 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SP110Q9HB58 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SP110Q9HB58 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.19■□□□□ 0.66
SP110Q9HB58 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SP110Q9HB58 TNXA-203ENST00000507684 2038 ntBASIC19.19■□□□□ 0.66
SP110Q9HB58 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SP110Q9HB58 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SP110Q9HB58 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SP110Q9HB58 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.19■□□□□ 0.66
SP110Q9HB58 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SP110Q9HB58 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.19■□□□□ 0.66
SP110Q9HB58 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.19■□□□□ 0.66
SP110Q9HB58 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SP110Q9HB58 ECEL1P2-202ENST00000465689 757 ntBASIC19.19■□□□□ 0.66
SP110Q9HB58 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.19■□□□□ 0.66
SP110Q9HB58 MIR4674-201ENST00000582457 87 ntBASIC19.19■□□□□ 0.66
SP110Q9HB58 AC145285.6-201ENST00000604632 637 ntBASIC19.19■□□□□ 0.66
SP110Q9HB58 AC068587.9-201ENST00000641814 219 ntBASIC19.19■□□□□ 0.66
SP110Q9HB58 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SP110Q9HB58 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SP110Q9HB58 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SP110Q9HB58 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SP110Q9HB58 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SP110Q9HB58 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SP110Q9HB58 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.18■□□□□ 0.66
SP110Q9HB58 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SP110Q9HB58 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SP110Q9HB58 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SP110Q9HB58 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.18■□□□□ 0.66
SP110Q9HB58 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.18■□□□□ 0.66
SP110Q9HB58 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SP110Q9HB58 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SP110Q9HB58 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.18■□□□□ 0.66
SP110Q9HB58 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.18■□□□□ 0.66
SP110Q9HB58 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SP110Q9HB58 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.18■□□□□ 0.66
SP110Q9HB58 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
SP110Q9HB58 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.18■□□□□ 0.66
SP110Q9HB58 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.18■□□□□ 0.66
SP110Q9HB58 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SP110Q9HB58 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SP110Q9HB58 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SP110Q9HB58 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SP110Q9HB58 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.18■□□□□ 0.66
SP110Q9HB58 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SP110Q9HB58 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.17■□□□□ 0.66
SP110Q9HB58 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.17■□□□□ 0.66
SP110Q9HB58 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SP110Q9HB58 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.17■□□□□ 0.66
SP110Q9HB58 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SP110Q9HB58 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SP110Q9HB58 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SP110Q9HB58 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SP110Q9HB58 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
SP110Q9HB58 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SP110Q9HB58 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SP110Q9HB58 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SP110Q9HB58 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SP110Q9HB58 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SP110Q9HB58 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SP110Q9HB58 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SP110Q9HB58 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SP110Q9HB58 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.17■□□□□ 0.66
SP110Q9HB58 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SP110Q9HB58 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SP110Q9HB58 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.16■□□□□ 0.66
SP110Q9HB58 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SP110Q9HB58 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SP110Q9HB58 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SP110Q9HB58 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SP110Q9HB58 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SP110Q9HB58 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SP110Q9HB58 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.16■□□□□ 0.66
SP110Q9HB58 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SP110Q9HB58 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SP110Q9HB58 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.16■□□□□ 0.66
SP110Q9HB58 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
SP110Q9HB58 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SP110Q9HB58 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SP110Q9HB58 AC008556.1-201ENST00000610908 2040 ntBASIC19.16■□□□□ 0.66
SP110Q9HB58 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SP110Q9HB58 AL109659.2-201ENST00000606809 1674 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms