Protein–RNA interactions for Protein: Q9BV90

SNRNP25, U11/U12 small nuclear ribonucleoprotein 25 kDa protein, humanhuman

Known RBP Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25Q9BV90 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNRNP25Q9BV90 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNRNP25Q9BV90 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.45■□□□□ 0.7
SNRNP25Q9BV90 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNRNP25Q9BV90 AC005082.1-201ENST00000413042 2259 ntBASIC19.45■□□□□ 0.7
SNRNP25Q9BV90 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNRNP25Q9BV90 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNRNP25Q9BV90 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNRNP25Q9BV90 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNRNP25Q9BV90 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNRNP25Q9BV90 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.44■□□□□ 0.7
SNRNP25Q9BV90 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNRNP25Q9BV90 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNRNP25Q9BV90 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SNRNP25Q9BV90 AC009113.1-201ENST00000570267 2443 ntBASIC19.44■□□□□ 0.7
SNRNP25Q9BV90 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNRNP25Q9BV90 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.44■□□□□ 0.7
SNRNP25Q9BV90 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNRNP25Q9BV90 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNRNP25Q9BV90 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNRNP25Q9BV90 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.44■□□□□ 0.7
SNRNP25Q9BV90 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.44■□□□□ 0.7
SNRNP25Q9BV90 MCCD1P1-208ENST00000445732 328 ntBASIC19.44■□□□□ 0.7
SNRNP25Q9BV90 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SNRNP25Q9BV90 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.44■□□□□ 0.7
SNRNP25Q9BV90 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNRNP25Q9BV90 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNRNP25Q9BV90 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.44■□□□□ 0.7
SNRNP25Q9BV90 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SNRNP25Q9BV90 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.44■□□□□ 0.7
SNRNP25Q9BV90 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNRNP25Q9BV90 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNRNP25Q9BV90 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNRNP25Q9BV90 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.44■□□□□ 0.7
SNRNP25Q9BV90 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.44■□□□□ 0.7
SNRNP25Q9BV90 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SNRNP25Q9BV90 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
SNRNP25Q9BV90 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNRNP25Q9BV90 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNRNP25Q9BV90 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNRNP25Q9BV90 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SNRNP25Q9BV90 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNRNP25Q9BV90 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.43■□□□□ 0.7
SNRNP25Q9BV90 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNRNP25Q9BV90 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
SNRNP25Q9BV90 SLC25A1P2-201ENST00000430693 912 ntBASIC19.43■□□□□ 0.7
SNRNP25Q9BV90 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.43■□□□□ 0.7
SNRNP25Q9BV90 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.43■□□□□ 0.7
SNRNP25Q9BV90 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNRNP25Q9BV90 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNRNP25Q9BV90 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.43■□□□□ 0.7
SNRNP25Q9BV90 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.43■□□□□ 0.7
SNRNP25Q9BV90 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNRNP25Q9BV90 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.43■□□□□ 0.7
SNRNP25Q9BV90 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.43■□□□□ 0.7
SNRNP25Q9BV90 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.43■□□□□ 0.7
SNRNP25Q9BV90 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNRNP25Q9BV90 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SNRNP25Q9BV90 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNRNP25Q9BV90 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SNRNP25Q9BV90 AC126763.1-201ENST00000552015 2118 ntBASIC19.43■□□□□ 0.7
SNRNP25Q9BV90 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.43■□□□□ 0.7
SNRNP25Q9BV90 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNRNP25Q9BV90 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.43■□□□□ 0.7
SNRNP25Q9BV90 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNRNP25Q9BV90 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNRNP25Q9BV90 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNRNP25Q9BV90 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNRNP25Q9BV90 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNRNP25Q9BV90 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNRNP25Q9BV90 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
SNRNP25Q9BV90 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.42■□□□□ 0.7
SNRNP25Q9BV90 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.42■□□□□ 0.7
SNRNP25Q9BV90 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNRNP25Q9BV90 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNRNP25Q9BV90 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNRNP25Q9BV90 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNRNP25Q9BV90 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.42■□□□□ 0.7
SNRNP25Q9BV90 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.42■□□□□ 0.7
SNRNP25Q9BV90 AP003041.3-201ENST00000527151 707 ntBASIC19.42■□□□□ 0.7
SNRNP25Q9BV90 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNRNP25Q9BV90 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNRNP25Q9BV90 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNRNP25Q9BV90 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNRNP25Q9BV90 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNRNP25Q9BV90 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNRNP25Q9BV90 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNRNP25Q9BV90 AC092338.2-201ENST00000568827 1415 ntBASIC19.42■□□□□ 0.7
SNRNP25Q9BV90 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNRNP25Q9BV90 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNRNP25Q9BV90 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNRNP25Q9BV90 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
SNRNP25Q9BV90 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.41■□□□□ 0.7
SNRNP25Q9BV90 CYP2D8P-201ENST00000433633 1490 ntBASIC19.41■□□□□ 0.7
SNRNP25Q9BV90 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNRNP25Q9BV90 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNRNP25Q9BV90 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
SNRNP25Q9BV90 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNRNP25Q9BV90 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNRNP25Q9BV90 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms