Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CPNE1Q99829 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.76■□□□□ 0.59
CPNE1Q99829 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE1Q99829 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE1Q99829 AC018470.1-201ENST00000624790 3129 ntBASIC18.76■□□□□ 0.59
CPNE1Q99829 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE1Q99829 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.76■□□□□ 0.59
CPNE1Q99829 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE1Q99829 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE1Q99829 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CPNE1Q99829 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE1Q99829 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
CPNE1Q99829 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CPNE1Q99829 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE1Q99829 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE1Q99829 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE1Q99829 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE1Q99829 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE1Q99829 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE1Q99829 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE1Q99829 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE1Q99829 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.76■□□□□ 0.59
CPNE1Q99829 AC091390.4-202ENST00000476426 537 ntBASIC18.76■□□□□ 0.59
CPNE1Q99829 AP002982.1-201ENST00000492365 877 ntBASIC18.76■□□□□ 0.59
CPNE1Q99829 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE1Q99829 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.76■□□□□ 0.59
CPNE1Q99829 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.76■□□□□ 0.59
CPNE1Q99829 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.76■□□□□ 0.59
CPNE1Q99829 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.76■□□□□ 0.59
CPNE1Q99829 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.76■□□□□ 0.59
CPNE1Q99829 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.76■□□□□ 0.59
CPNE1Q99829 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CPNE1Q99829 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE1Q99829 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE1Q99829 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE1Q99829 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CPNE1Q99829 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CPNE1Q99829 HCG11-201ENST00000411553 5696 ntBASIC18.76■□□□□ 0.59
CPNE1Q99829 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE1Q99829 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.76■□□□□ 0.59
CPNE1Q99829 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE1Q99829 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CPNE1Q99829 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CPNE1Q99829 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE1Q99829 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE1Q99829 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE1Q99829 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE1Q99829 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE1Q99829 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE1Q99829 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE1Q99829 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.75■□□□□ 0.59
CPNE1Q99829 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.75■□□□□ 0.59
CPNE1Q99829 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE1Q99829 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE1Q99829 NOC2LP2-201ENST00000407594 1944 ntBASIC18.75■□□□□ 0.59
CPNE1Q99829 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.75■□□□□ 0.59
CPNE1Q99829 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE1Q99829 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.75■□□□□ 0.59
CPNE1Q99829 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE1Q99829 KSR1P1-201ENST00000446298 240 ntBASIC18.75■□□□□ 0.59
CPNE1Q99829 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.75■□□□□ 0.59
CPNE1Q99829 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE1Q99829 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.75■□□□□ 0.59
CPNE1Q99829 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.75■□□□□ 0.59
CPNE1Q99829 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE1Q99829 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE1Q99829 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE1Q99829 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE1Q99829 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE1Q99829 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE1Q99829 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE1Q99829 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE1Q99829 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
CPNE1Q99829 HTR7P1-201ENST00000538670 1336 ntBASIC18.74■□□□□ 0.59
CPNE1Q99829 AC112777.1-201ENST00000540175 1423 ntBASIC18.74■□□□□ 0.59
CPNE1Q99829 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE1Q99829 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.74■□□□□ 0.59
CPNE1Q99829 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE1Q99829 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
CPNE1Q99829 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE1Q99829 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE1Q99829 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE1Q99829 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE1Q99829 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE1Q99829 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.74■□□□□ 0.59
CPNE1Q99829 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.74■□□□□ 0.59
CPNE1Q99829 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
CPNE1Q99829 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.74■□□□□ 0.59
CPNE1Q99829 AC004951.3-201ENST00000418645 1148 ntBASIC18.74■□□□□ 0.59
CPNE1Q99829 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.74■□□□□ 0.59
CPNE1Q99829 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.74■□□□□ 0.59
CPNE1Q99829 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.74■□□□□ 0.59
CPNE1Q99829 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.74■□□□□ 0.59
CPNE1Q99829 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.74■□□□□ 0.59
CPNE1Q99829 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE1Q99829 AC026471.1-201ENST00000564629 3026 ntBASIC18.74■□□□□ 0.59
CPNE1Q99829 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE1Q99829 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.74■□□□□ 0.59
CPNE1Q99829 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE1Q99829 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms