Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SNX18Q96RF0 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNX18Q96RF0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SNX18Q96RF0 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNX18Q96RF0 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNX18Q96RF0 KRT17P3-201ENST00000420566 1262 ntBASIC17.07■□□□□ 0.32
SNX18Q96RF0 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
SNX18Q96RF0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.07■□□□□ 0.32
SNX18Q96RF0 AL160286.2-201ENST00000567150 934 ntBASIC17.07■□□□□ 0.32
SNX18Q96RF0 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.07■□□□□ 0.32
SNX18Q96RF0 FAM197Y4-202ENST00000622692 608 ntBASIC17.07■□□□□ 0.32
SNX18Q96RF0 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNX18Q96RF0 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.07■□□□□ 0.32
SNX18Q96RF0 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNX18Q96RF0 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SNX18Q96RF0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.07■□□□□ 0.32
SNX18Q96RF0 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNX18Q96RF0 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.07■□□□□ 0.32
SNX18Q96RF0 AL031598.1-201ENST00000561511 1773 ntBASIC17.07■□□□□ 0.32
SNX18Q96RF0 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNX18Q96RF0 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SNX18Q96RF0 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.07■□□□□ 0.32
SNX18Q96RF0 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.07■□□□□ 0.32
SNX18Q96RF0 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
SNX18Q96RF0 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SNX18Q96RF0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNX18Q96RF0 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SNX18Q96RF0 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNX18Q96RF0 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNX18Q96RF0 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SNX18Q96RF0 BICD1-207ENST00000551848 1962 ntBASIC17.06■□□□□ 0.32
SNX18Q96RF0 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SNX18Q96RF0 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNX18Q96RF0 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNX18Q96RF0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNX18Q96RF0 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNX18Q96RF0 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNX18Q96RF0 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.06■□□□□ 0.32
SNX18Q96RF0 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.06■□□□□ 0.32
SNX18Q96RF0 RPS2P4-201ENST00000476944 856 ntBASIC17.06■□□□□ 0.32
SNX18Q96RF0 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.06■□□□□ 0.32
SNX18Q96RF0 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.06■□□□□ 0.32
SNX18Q96RF0 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.06■□□□□ 0.32
SNX18Q96RF0 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.06■□□□□ 0.32
SNX18Q96RF0 HLA-A-209ENST00000638375 975 ntBASIC17.06■□□□□ 0.32
SNX18Q96RF0 Z98044.1-201ENST00000632503 1764 ntBASIC17.06■□□□□ 0.32
SNX18Q96RF0 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SNX18Q96RF0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNX18Q96RF0 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNX18Q96RF0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNX18Q96RF0 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SNX18Q96RF0 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.06■□□□□ 0.32
SNX18Q96RF0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SNX18Q96RF0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SNX18Q96RF0 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.06■□□□□ 0.32
SNX18Q96RF0 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SNX18Q96RF0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX18Q96RF0 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SNX18Q96RF0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SNX18Q96RF0 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.05■□□□□ 0.32
SNX18Q96RF0 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX18Q96RF0 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.05■□□□□ 0.32
SNX18Q96RF0 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.05■□□□□ 0.32
SNX18Q96RF0 AC090164.3-201ENST00000610780 2143 ntBASIC17.05■□□□□ 0.32
SNX18Q96RF0 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
SNX18Q96RF0 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
SNX18Q96RF0 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNX18Q96RF0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.05■□□□□ 0.32
SNX18Q96RF0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SNX18Q96RF0 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNX18Q96RF0 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNX18Q96RF0 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNX18Q96RF0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.05■□□□□ 0.32
SNX18Q96RF0 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.05■□□□□ 0.32
SNX18Q96RF0 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
SNX18Q96RF0 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.05■□□□□ 0.32
SNX18Q96RF0 C1QBPP2-201ENST00000528754 825 ntBASIC17.05■□□□□ 0.32
SNX18Q96RF0 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.05■□□□□ 0.32
SNX18Q96RF0 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.05■□□□□ 0.32
SNX18Q96RF0 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.05■□□□□ 0.32
SNX18Q96RF0 MTDHP1-201ENST00000605323 784 ntBASIC17.05■□□□□ 0.32
SNX18Q96RF0 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
SNX18Q96RF0 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.05■□□□□ 0.32
SNX18Q96RF0 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX18Q96RF0 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX18Q96RF0 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX18Q96RF0 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX18Q96RF0 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SNX18Q96RF0 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNX18Q96RF0 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNX18Q96RF0 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX18Q96RF0 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SNX18Q96RF0 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNX18Q96RF0 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX18Q96RF0 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX18Q96RF0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNX18Q96RF0 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX18Q96RF0 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX18Q96RF0 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.05■□□□□ 0.32
SNX18Q96RF0 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms