Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00479Q96M42 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00479Q96M42 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00479Q96M42 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00479Q96M42 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
LINC00479Q96M42 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00479Q96M42 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00479Q96M42 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00479Q96M42 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
LINC00479Q96M42 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC00479Q96M42 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00479Q96M42 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC14.32□□□□□ -0.12
LINC00479Q96M42 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00479Q96M42 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00479Q96M42 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00479Q96M42 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
LINC00479Q96M42 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00479Q96M42 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00479Q96M42 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC14.32□□□□□ -0.12
LINC00479Q96M42 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00479Q96M42 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC14.32□□□□□ -0.12
LINC00479Q96M42 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC14.32□□□□□ -0.12
LINC00479Q96M42 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00479Q96M42 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00479Q96M42 AC073210.2-201ENST00000430369 194 ntBASIC14.32□□□□□ -0.12
LINC00479Q96M42 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC14.32□□□□□ -0.12
LINC00479Q96M42 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00479Q96M42 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC00479Q96M42 MAZ-216ENST00000616501 991 ntTSL 5 BASIC14.32□□□□□ -0.12
LINC00479Q96M42 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC14.32□□□□□ -0.12
LINC00479Q96M42 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00479Q96M42 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00479Q96M42 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC00479Q96M42 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00479Q96M42 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00479Q96M42 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
LINC00479Q96M42 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00479Q96M42 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
LINC00479Q96M42 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00479Q96M42 AC009053.2-201ENST00000563701 2365 ntBASIC14.32□□□□□ -0.12
LINC00479Q96M42 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00479Q96M42 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.32□□□□□ -0.12
LINC00479Q96M42 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00479Q96M42 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC00479Q96M42 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00479Q96M42 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00479Q96M42 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00479Q96M42 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00479Q96M42 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00479Q96M42 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00479Q96M42 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
LINC00479Q96M42 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
LINC00479Q96M42 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC00479Q96M42 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00479Q96M42 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00479Q96M42 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00479Q96M42 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
LINC00479Q96M42 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00479Q96M42 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00479Q96M42 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC14.31□□□□□ -0.12
LINC00479Q96M42 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00479Q96M42 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC00479Q96M42 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LINC00479Q96M42 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
LINC00479Q96M42 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC00479Q96M42 PCDHA12-202ENST00000613593 2588 ntBASIC14.31□□□□□ -0.12
LINC00479Q96M42 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC00479Q96M42 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00479Q96M42 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00479Q96M42 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00479Q96M42 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00479Q96M42 CRK-204ENST00000574295 1391 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC00479Q96M42 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC14.31□□□□□ -0.12
LINC00479Q96M42 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00479Q96M42 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC00479Q96M42 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00479Q96M42 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC00479Q96M42 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC00479Q96M42 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
LINC00479Q96M42 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
LINC00479Q96M42 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC00479Q96M42 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00479Q96M42 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00479Q96M42 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC00479Q96M42 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC14.3□□□□□ -0.12
LINC00479Q96M42 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00479Q96M42 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
LINC00479Q96M42 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC00479Q96M42 GNAS-203ENST00000306120 1878 ntBASIC14.3□□□□□ -0.12
LINC00479Q96M42 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LINC00479Q96M42 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC14.3□□□□□ -0.12
LINC00479Q96M42 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00479Q96M42 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
LINC00479Q96M42 GGT1-206ENST00000404223 952 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC00479Q96M42 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC00479Q96M42 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC14.3□□□□□ -0.12
LINC00479Q96M42 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC14.3□□□□□ -0.12
LINC00479Q96M42 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00479Q96M42 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00479Q96M42 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms