Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
ITCHQ96J02 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.88■□□□□ 0.45
ITCHQ96J02 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ITCHQ96J02 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ITCHQ96J02 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.88■□□□□ 0.45
ITCHQ96J02 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.88■□□□□ 0.45
ITCHQ96J02 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ITCHQ96J02 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
ITCHQ96J02 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ITCHQ96J02 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
ITCHQ96J02 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ITCHQ96J02 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ITCHQ96J02 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ITCHQ96J02 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.87■□□□□ 0.45
ITCHQ96J02 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.87■□□□□ 0.45
ITCHQ96J02 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.87■□□□□ 0.45
ITCHQ96J02 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ITCHQ96J02 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.87■□□□□ 0.45
ITCHQ96J02 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ITCHQ96J02 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.87■□□□□ 0.45
ITCHQ96J02 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
ITCHQ96J02 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.87■□□□□ 0.45
ITCHQ96J02 AC008403.3-201ENST00000598924 454 ntBASIC17.87■□□□□ 0.45
ITCHQ96J02 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ITCHQ96J02 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ITCHQ96J02 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
ITCHQ96J02 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ITCHQ96J02 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ITCHQ96J02 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
ITCHQ96J02 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ITCHQ96J02 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.86■□□□□ 0.45
ITCHQ96J02 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
ITCHQ96J02 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ITCHQ96J02 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ITCHQ96J02 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ITCHQ96J02 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ITCHQ96J02 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.86■□□□□ 0.45
ITCHQ96J02 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ITCHQ96J02 HTR7P1-202ENST00000624664 4411 ntBASIC17.86■□□□□ 0.45
ITCHQ96J02 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
ITCHQ96J02 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
ITCHQ96J02 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ITCHQ96J02 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ITCHQ96J02 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ITCHQ96J02 KRT17P3-201ENST00000420566 1262 ntBASIC17.86■□□□□ 0.45
ITCHQ96J02 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.86■□□□□ 0.45
ITCHQ96J02 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.86■□□□□ 0.45
ITCHQ96J02 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ITCHQ96J02 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.86■□□□□ 0.45
ITCHQ96J02 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.86■□□□□ 0.45
ITCHQ96J02 MTDHP1-201ENST00000605323 784 ntBASIC17.86■□□□□ 0.45
ITCHQ96J02 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.86■□□□□ 0.45
ITCHQ96J02 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ITCHQ96J02 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
ITCHQ96J02 AL162741.1-201ENST00000565563 1558 ntBASIC17.86■□□□□ 0.45
ITCHQ96J02 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.86■□□□□ 0.45
ITCHQ96J02 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.86■□□□□ 0.45
ITCHQ96J02 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
ITCHQ96J02 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ITCHQ96J02 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.86■□□□□ 0.45
ITCHQ96J02 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ITCHQ96J02 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
ITCHQ96J02 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ITCHQ96J02 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ITCHQ96J02 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ITCHQ96J02 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ITCHQ96J02 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.85■□□□□ 0.45
ITCHQ96J02 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ITCHQ96J02 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ITCHQ96J02 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ITCHQ96J02 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.85■□□□□ 0.45
ITCHQ96J02 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ITCHQ96J02 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ITCHQ96J02 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.85■□□□□ 0.45
ITCHQ96J02 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ITCHQ96J02 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ITCHQ96J02 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
ITCHQ96J02 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.85■□□□□ 0.45
ITCHQ96J02 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ITCHQ96J02 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ITCHQ96J02 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ITCHQ96J02 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.85■□□□□ 0.45
ITCHQ96J02 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.85■□□□□ 0.45
ITCHQ96J02 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.85■□□□□ 0.45
ITCHQ96J02 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.85■□□□□ 0.45
ITCHQ96J02 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.85■□□□□ 0.45
ITCHQ96J02 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.85■□□□□ 0.45
ITCHQ96J02 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ITCHQ96J02 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.85■□□□□ 0.45
ITCHQ96J02 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ITCHQ96J02 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.85■□□□□ 0.45
ITCHQ96J02 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ITCHQ96J02 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.85■□□□□ 0.45
ITCHQ96J02 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
ITCHQ96J02 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
ITCHQ96J02 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
ITCHQ96J02 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ITCHQ96J02 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ITCHQ96J02 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
ITCHQ96J02 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms