Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNIH3Q8TBE1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CNIH3Q8TBE1 AC034268.1-201ENST00000441047 882 ntBASIC17.14■□□□□ 0.33
CNIH3Q8TBE1 YBX1P10-201ENST00000444752 975 ntBASIC17.14■□□□□ 0.33
CNIH3Q8TBE1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.14■□□□□ 0.33
CNIH3Q8TBE1 NTF6G-201ENST00000591094 616 ntBASIC17.14■□□□□ 0.33
CNIH3Q8TBE1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.14■□□□□ 0.33
CNIH3Q8TBE1 AP006587.1-201ENST00000534129 1502 ntBASIC17.14■□□□□ 0.33
CNIH3Q8TBE1 SIRPAP1-201ENST00000448467 1770 ntBASIC17.14■□□□□ 0.33
CNIH3Q8TBE1 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CNIH3Q8TBE1 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNIH3Q8TBE1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CNIH3Q8TBE1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNIH3Q8TBE1 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CNIH3Q8TBE1 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNIH3Q8TBE1 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNIH3Q8TBE1 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 AL645608.8-201ENST00000606034 2086 ntBASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNIH3Q8TBE1 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.12■□□□□ 0.33
CNIH3Q8TBE1 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNIH3Q8TBE1 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNIH3Q8TBE1 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNIH3Q8TBE1 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CNIH3Q8TBE1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNIH3Q8TBE1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNIH3Q8TBE1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.12■□□□□ 0.33
CNIH3Q8TBE1 AL390719.1-204ENST00000412397 1219 ntBASIC17.12■□□□□ 0.33
CNIH3Q8TBE1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CNIH3Q8TBE1 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CNIH3Q8TBE1 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CNIH3Q8TBE1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CNIH3Q8TBE1 AC011767.1-201ENST00000617410 1153 ntBASIC17.12■□□□□ 0.33
CNIH3Q8TBE1 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNIH3Q8TBE1 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNIH3Q8TBE1 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.12■□□□□ 0.33
CNIH3Q8TBE1 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CNIH3Q8TBE1 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNIH3Q8TBE1 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.12■□□□□ 0.33
CNIH3Q8TBE1 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CNIH3Q8TBE1 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNIH3Q8TBE1 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNIH3Q8TBE1 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNIH3Q8TBE1 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNIH3Q8TBE1 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.12■□□□□ 0.33
CNIH3Q8TBE1 AC138028.4-201ENST00000564984 1845 ntBASIC17.12■□□□□ 0.33
CNIH3Q8TBE1 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNIH3Q8TBE1 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CNIH3Q8TBE1 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNIH3Q8TBE1 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNIH3Q8TBE1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CNIH3Q8TBE1 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNIH3Q8TBE1 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNIH3Q8TBE1 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNIH3Q8TBE1 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNIH3Q8TBE1 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNIH3Q8TBE1 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNIH3Q8TBE1 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.11■□□□□ 0.33
CNIH3Q8TBE1 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNIH3Q8TBE1 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNIH3Q8TBE1 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
CNIH3Q8TBE1 HEIH-201ENST00000623091 1652 ntBASIC17.11■□□□□ 0.33
CNIH3Q8TBE1 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms