Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIML2Q8N7C3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIML2Q8N7C3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIML2Q8N7C3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIML2Q8N7C3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.12■□□□□ 0.49
TRIML2Q8N7C3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TRIML2Q8N7C3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIML2Q8N7C3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
TRIML2Q8N7C3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIML2Q8N7C3 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
TRIML2Q8N7C3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIML2Q8N7C3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
TRIML2Q8N7C3 AC069152.1-201ENST00000438030 544 ntBASIC18.12■□□□□ 0.49
TRIML2Q8N7C3 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIML2Q8N7C3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.12■□□□□ 0.49
TRIML2Q8N7C3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.12■□□□□ 0.49
TRIML2Q8N7C3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
TRIML2Q8N7C3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIML2Q8N7C3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.12■□□□□ 0.49
TRIML2Q8N7C3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIML2Q8N7C3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIML2Q8N7C3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.12■□□□□ 0.49
TRIML2Q8N7C3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRIML2Q8N7C3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRIML2Q8N7C3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.11■□□□□ 0.49
TRIML2Q8N7C3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIML2Q8N7C3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIML2Q8N7C3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIML2Q8N7C3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIML2Q8N7C3 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.11■□□□□ 0.49
TRIML2Q8N7C3 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIML2Q8N7C3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIML2Q8N7C3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIML2Q8N7C3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.11■□□□□ 0.49
TRIML2Q8N7C3 PRKY-204ENST00000533551 1019 ntBASIC18.11■□□□□ 0.49
TRIML2Q8N7C3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIML2Q8N7C3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.11■□□□□ 0.49
TRIML2Q8N7C3 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.11■□□□□ 0.49
TRIML2Q8N7C3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TRIML2Q8N7C3 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIML2Q8N7C3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.11■□□□□ 0.49
TRIML2Q8N7C3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
TRIML2Q8N7C3 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIML2Q8N7C3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
TRIML2Q8N7C3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIML2Q8N7C3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIML2Q8N7C3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIML2Q8N7C3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIML2Q8N7C3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TRIML2Q8N7C3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TRIML2Q8N7C3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIML2Q8N7C3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIML2Q8N7C3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIML2Q8N7C3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIML2Q8N7C3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIML2Q8N7C3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIML2Q8N7C3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIML2Q8N7C3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIML2Q8N7C3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIML2Q8N7C3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIML2Q8N7C3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIML2Q8N7C3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIML2Q8N7C3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIML2Q8N7C3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIML2Q8N7C3 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIML2Q8N7C3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIML2Q8N7C3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIML2Q8N7C3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIML2Q8N7C3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIML2Q8N7C3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIML2Q8N7C3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIML2Q8N7C3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIML2Q8N7C3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIML2Q8N7C3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIML2Q8N7C3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIML2Q8N7C3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIML2Q8N7C3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIML2Q8N7C3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIML2Q8N7C3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIML2Q8N7C3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIML2Q8N7C3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.1■□□□□ 0.49
TRIML2Q8N7C3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.1■□□□□ 0.49
TRIML2Q8N7C3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIML2Q8N7C3 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIML2Q8N7C3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIML2Q8N7C3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TRIML2Q8N7C3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIML2Q8N7C3 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIML2Q8N7C3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIML2Q8N7C3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TRIML2Q8N7C3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIML2Q8N7C3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIML2Q8N7C3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIML2Q8N7C3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIML2Q8N7C3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
TRIML2Q8N7C3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
TRIML2Q8N7C3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
TRIML2Q8N7C3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIML2Q8N7C3 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIML2Q8N7C3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms