Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ARHGEF39Q8N4T4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.7■□□□□ 0.42
ARHGEF39Q8N4T4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ARHGEF39Q8N4T4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ARHGEF39Q8N4T4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ARHGEF39Q8N4T4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ARHGEF39Q8N4T4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
ARHGEF39Q8N4T4 KRT18P41-201ENST00000518924 1277 ntBASIC17.7■□□□□ 0.42
ARHGEF39Q8N4T4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.7■□□□□ 0.42
ARHGEF39Q8N4T4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.7■□□□□ 0.42
ARHGEF39Q8N4T4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
ARHGEF39Q8N4T4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ARHGEF39Q8N4T4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ARHGEF39Q8N4T4 KRT8P7-201ENST00000533003 1432 ntBASIC17.7■□□□□ 0.42
ARHGEF39Q8N4T4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
ARHGEF39Q8N4T4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
ARHGEF39Q8N4T4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.7■□□□□ 0.42
ARHGEF39Q8N4T4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
ARHGEF39Q8N4T4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ARHGEF39Q8N4T4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ARHGEF39Q8N4T4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.7■□□□□ 0.42
ARHGEF39Q8N4T4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 KRT18P38-201ENST00000449496 1282 ntBASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 AC093525.10-201ENST00000625130 1569 ntBASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 AC034236.2-201ENST00000606662 1610 ntBASIC17.69■□□□□ 0.42
ARHGEF39Q8N4T4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.68■□□□□ 0.42
ARHGEF39Q8N4T4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ARHGEF39Q8N4T4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.68■□□□□ 0.42
ARHGEF39Q8N4T4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.68■□□□□ 0.42
ARHGEF39Q8N4T4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.68■□□□□ 0.42
ARHGEF39Q8N4T4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.68■□□□□ 0.42
ARHGEF39Q8N4T4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ARHGEF39Q8N4T4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.68■□□□□ 0.42
ARHGEF39Q8N4T4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ARHGEF39Q8N4T4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
ARHGEF39Q8N4T4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ARHGEF39Q8N4T4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.68■□□□□ 0.42
ARHGEF39Q8N4T4 AC140113.3-201ENST00000605663 199 ntBASIC17.68■□□□□ 0.42
ARHGEF39Q8N4T4 AC112497.1-201ENST00000624824 639 ntBASIC17.68■□□□□ 0.42
ARHGEF39Q8N4T4 AL590326.2-201ENST00000625139 305 ntBASIC17.68■□□□□ 0.42
ARHGEF39Q8N4T4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ARHGEF39Q8N4T4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ARHGEF39Q8N4T4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.68■□□□□ 0.42
ARHGEF39Q8N4T4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
ARHGEF39Q8N4T4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.68■□□□□ 0.42
ARHGEF39Q8N4T4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ARHGEF39Q8N4T4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.67■□□□□ 0.42
ARHGEF39Q8N4T4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.67■□□□□ 0.42
ARHGEF39Q8N4T4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
ARHGEF39Q8N4T4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ARHGEF39Q8N4T4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ARHGEF39Q8N4T4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
ARHGEF39Q8N4T4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ARHGEF39Q8N4T4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.67■□□□□ 0.42
ARHGEF39Q8N4T4 STARP1-201ENST00000397973 869 ntBASIC17.67■□□□□ 0.42
ARHGEF39Q8N4T4 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.67■□□□□ 0.42
ARHGEF39Q8N4T4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.67■□□□□ 0.42
ARHGEF39Q8N4T4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.67■□□□□ 0.42
ARHGEF39Q8N4T4 KRT18P35-201ENST00000510488 1269 ntBASIC17.67■□□□□ 0.42
ARHGEF39Q8N4T4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
ARHGEF39Q8N4T4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.67■□□□□ 0.42
ARHGEF39Q8N4T4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.67■□□□□ 0.42
ARHGEF39Q8N4T4 AL445228.2-201ENST00000605589 952 ntBASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms