Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3H3Q8IXZ2 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ZC3H3Q8IXZ2 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3H3Q8IXZ2 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3H3Q8IXZ2 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3H3Q8IXZ2 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3H3Q8IXZ2 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3H3Q8IXZ2 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3H3Q8IXZ2 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3H3Q8IXZ2 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3H3Q8IXZ2 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3H3Q8IXZ2 AP000593.1-201ENST00000393668 712 ntBASIC20.35■□□□□ 0.85
ZC3H3Q8IXZ2 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.35■□□□□ 0.85
ZC3H3Q8IXZ2 AL390955.1-201ENST00000428694 934 ntBASIC20.35■□□□□ 0.85
ZC3H3Q8IXZ2 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3H3Q8IXZ2 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3H3Q8IXZ2 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.35■□□□□ 0.85
ZC3H3Q8IXZ2 AL390961.4-201ENST00000623958 2535 ntBASIC20.35■□□□□ 0.85
ZC3H3Q8IXZ2 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3H3Q8IXZ2 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3H3Q8IXZ2 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.35■□□□□ 0.85
ZC3H3Q8IXZ2 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3H3Q8IXZ2 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.35■□□□□ 0.85
ZC3H3Q8IXZ2 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
ZC3H3Q8IXZ2 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
ZC3H3Q8IXZ2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
ZC3H3Q8IXZ2 AC034236.2-201ENST00000606662 1610 ntBASIC20.35■□□□□ 0.85
ZC3H3Q8IXZ2 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.34■□□□□ 0.85
ZC3H3Q8IXZ2 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3H3Q8IXZ2 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
ZC3H3Q8IXZ2 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3H3Q8IXZ2 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3H3Q8IXZ2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3H3Q8IXZ2 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3H3Q8IXZ2 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.34■□□□□ 0.85
ZC3H3Q8IXZ2 TSPY17P-201ENST00000450329 467 ntBASIC20.34■□□□□ 0.85
ZC3H3Q8IXZ2 AP003041.3-201ENST00000527151 707 ntBASIC20.34■□□□□ 0.85
ZC3H3Q8IXZ2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
ZC3H3Q8IXZ2 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3H3Q8IXZ2 MIR4497-201ENST00000583208 89 ntBASIC20.34■□□□□ 0.85
ZC3H3Q8IXZ2 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3H3Q8IXZ2 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3H3Q8IXZ2 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3H3Q8IXZ2 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3H3Q8IXZ2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3H3Q8IXZ2 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ZC3H3Q8IXZ2 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.34■□□□□ 0.85
ZC3H3Q8IXZ2 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3H3Q8IXZ2 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3H3Q8IXZ2 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.33■□□□□ 0.85
ZC3H3Q8IXZ2 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.33■□□□□ 0.85
ZC3H3Q8IXZ2 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZC3H3Q8IXZ2 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ZC3H3Q8IXZ2 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.33■□□□□ 0.85
ZC3H3Q8IXZ2 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.33■□□□□ 0.85
ZC3H3Q8IXZ2 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ZC3H3Q8IXZ2 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ZC3H3Q8IXZ2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZC3H3Q8IXZ2 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
ZC3H3Q8IXZ2 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.33■□□□□ 0.85
ZC3H3Q8IXZ2 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZC3H3Q8IXZ2 TSPY15P-201ENST00000457163 923 ntBASIC20.33■□□□□ 0.85
ZC3H3Q8IXZ2 WWOX-216ENST00000569818 525 ntBASIC20.33■□□□□ 0.85
ZC3H3Q8IXZ2 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.33■□□□□ 0.85
ZC3H3Q8IXZ2 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZC3H3Q8IXZ2 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZC3H3Q8IXZ2 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
ZC3H3Q8IXZ2 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.33■□□□□ 0.84
ZC3H3Q8IXZ2 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZC3H3Q8IXZ2 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZC3H3Q8IXZ2 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ZC3H3Q8IXZ2 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.33■□□□□ 0.84
ZC3H3Q8IXZ2 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.33■□□□□ 0.84
ZC3H3Q8IXZ2 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZC3H3Q8IXZ2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H3Q8IXZ2 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
ZC3H3Q8IXZ2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.32■□□□□ 0.84
ZC3H3Q8IXZ2 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.32■□□□□ 0.84
ZC3H3Q8IXZ2 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.32■□□□□ 0.84
ZC3H3Q8IXZ2 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H3Q8IXZ2 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
ZC3H3Q8IXZ2 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H3Q8IXZ2 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.32■□□□□ 0.84
ZC3H3Q8IXZ2 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H3Q8IXZ2 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
ZC3H3Q8IXZ2 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.32■□□□□ 0.84
ZC3H3Q8IXZ2 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
ZC3H3Q8IXZ2 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H3Q8IXZ2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.32■□□□□ 0.84
ZC3H3Q8IXZ2 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H3Q8IXZ2 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H3Q8IXZ2 AC036111.1-201ENST00000533973 1582 ntBASIC20.32■□□□□ 0.84
ZC3H3Q8IXZ2 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H3Q8IXZ2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.32■□□□□ 0.84
ZC3H3Q8IXZ2 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
ZC3H3Q8IXZ2 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H3Q8IXZ2 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H3Q8IXZ2 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H3Q8IXZ2 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H3Q8IXZ2 KRT17P2-201ENST00000300992 1314 ntBASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms