Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDKL3Q8IVW4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDKL3Q8IVW4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDKL3Q8IVW4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.28■□□□□ 0.68
CDKL3Q8IVW4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CDKL3Q8IVW4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDKL3Q8IVW4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.28■□□□□ 0.68
CDKL3Q8IVW4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDKL3Q8IVW4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CDKL3Q8IVW4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
CDKL3Q8IVW4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDKL3Q8IVW4 AC073592.3-201ENST00000625118 1834 ntBASIC19.28■□□□□ 0.68
CDKL3Q8IVW4 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CDKL3Q8IVW4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.27■□□□□ 0.68
CDKL3Q8IVW4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDKL3Q8IVW4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.27■□□□□ 0.68
CDKL3Q8IVW4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDKL3Q8IVW4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDKL3Q8IVW4 RCC2P3-201ENST00000418112 1537 ntBASIC19.27■□□□□ 0.68
CDKL3Q8IVW4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDKL3Q8IVW4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.27■□□□□ 0.68
CDKL3Q8IVW4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDKL3Q8IVW4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CDKL3Q8IVW4 UBE2SP1-201ENST00000450587 669 ntBASIC19.27■□□□□ 0.68
CDKL3Q8IVW4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDKL3Q8IVW4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
CDKL3Q8IVW4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.27■□□□□ 0.68
CDKL3Q8IVW4 DGCR10-201ENST00000609839 495 ntBASIC19.27■□□□□ 0.68
CDKL3Q8IVW4 MYC-208ENST00000641036 567 ntBASIC19.27■□□□□ 0.68
CDKL3Q8IVW4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CDKL3Q8IVW4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDKL3Q8IVW4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDKL3Q8IVW4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.27■□□□□ 0.68
CDKL3Q8IVW4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDKL3Q8IVW4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.27■□□□□ 0.67
CDKL3Q8IVW4 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.27■□□□□ 0.67
CDKL3Q8IVW4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDKL3Q8IVW4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDKL3Q8IVW4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDKL3Q8IVW4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDKL3Q8IVW4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDKL3Q8IVW4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDKL3Q8IVW4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDKL3Q8IVW4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CDKL3Q8IVW4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDKL3Q8IVW4 GCSHP5-201ENST00000443090 522 ntBASIC19.26■□□□□ 0.67
CDKL3Q8IVW4 AL158047.1-201ENST00000445918 881 ntBASIC19.26■□□□□ 0.67
CDKL3Q8IVW4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.26■□□□□ 0.67
CDKL3Q8IVW4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.26■□□□□ 0.67
CDKL3Q8IVW4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.26■□□□□ 0.67
CDKL3Q8IVW4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.26■□□□□ 0.67
CDKL3Q8IVW4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDKL3Q8IVW4 AC079598.2-202ENST00000546624 1451 ntBASIC19.26■□□□□ 0.67
CDKL3Q8IVW4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDKL3Q8IVW4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDKL3Q8IVW4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CDKL3Q8IVW4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDKL3Q8IVW4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.26■□□□□ 0.67
CDKL3Q8IVW4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 AC126763.1-201ENST00000552015 2118 ntBASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 NUDT16P1-203ENST00000513809 620 ntBASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 AP001412.1-201ENST00000608405 714 ntBASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms